Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC107016.2-201ENST00000547968 190 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 RN7SKP247-201ENST00000411094 308 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC105402.1-201ENST00000413336 545 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 MTND2P11-201ENST00000423638 648 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 AP001207.2-201ENST00000519490 539 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC079089.3-201ENST00000603094 673 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC098826.3-201ENST00000603823 466 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
IFT140Q96RY7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
IFT140Q96RY7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
IFT140Q96RY7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
IFT140Q96RY7 AC005332.5-201ENST00000591222 2919 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IFT140Q96RY7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
IFT140Q96RY7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IFT140Q96RY7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
IFT140Q96RY7 RNU6-249P-201ENST00000363016 102 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 AL603825.1-201ENST00000438481 80 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 snoU13.15-201ENST00000459407 104 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
IFT140Q96RY7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.93□□□□□ -1.62
IFT140Q96RY7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.93□□□□□ -1.62
IFT140Q96RY7 SCGB1D5P-201ENST00000515134 247 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 AC015871.2-201ENST00000603605 948 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.93□□□□□ -1.62
IFT140Q96RY7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
IFT140Q96RY7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
IFT140Q96RY7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
IFT140Q96RY7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 MIR196B-201ENST00000384852 84 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 NIPA2P5-201ENST00000452282 464 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 SEPT7P3-201ENST00000455017 621 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.92□□□□□ -1.62
IFT140Q96RY7 Y_RNA.673-201ENST00000516306 88 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 MIR4425-201ENST00000580572 84 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 RPS4XP5-202ENST00000449995 1334 ntBASIC4.92□□□□□ -1.62
IFT140Q96RY7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC017007.4-201ENST00000503353 1352 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
IFT140Q96RY7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 ZNF658B-202ENST00000615961 3375 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC012078.1-201ENST00000405035 1646 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 RNU6-304P-201ENST00000364855 107 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC002075.2-201ENST00000425207 252 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 RPS12P18-201ENST00000442381 270 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 AP000936.2-201ENST00000447151 681 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC099560.2-201ENST00000457554 255 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC008413.1-201ENST00000511864 177 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 MIR2276-201ENST00000516886 89 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
IFT140Q96RY7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 AC017002.4-201ENST00000604721 1525 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
IFT140Q96RY7 MTND4P26-201ENST00000415971 1359 ntBASIC4.91□□□□□ -1.62
IFT140Q96RY7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.9□□□□□ -1.62
IFT140Q96RY7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
IFT140Q96RY7 AL356489.2-201ENST00000566968 3528 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 RNA5SP322-201ENST00000363617 119 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.9□□□□□ -1.62
IFT140Q96RY7 RPL23AP71-201ENST00000470966 469 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 SYT14P1-201ENST00000481459 721 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
IFT140Q96RY7 MIR4738-201ENST00000579134 87 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.9□□□□□ -1.62
IFT140Q96RY7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
IFT140Q96RY7 AP004607.9-201ENST00000618202 316 ntBASIC4.9□□□□□ -1.62
IFT140Q96RY7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
IFT140Q96RY7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
IFT140Q96RY7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT140Q96RY7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
IFT140Q96RY7 SRIP2-201ENST00000428470 166 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 RPL12P26-201ENST00000452430 487 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 ANXA2P1-201ENST00000505539 926 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 AC109329.2-201ENST00000519658 482 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.89□□□□□ -1.63
IFT140Q96RY7 AL034351.1-201ENST00000605288 668 ntBASIC4.89□□□□□ -1.63
IFT140Q96RY7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
IFT140Q96RY7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms