Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 MIR218-2-201ENST00000385006 110 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 DNAJC19P6-201ENST00000401853 280 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RNU6-55P-201ENST00000411092 107 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RNU6-954P-201ENST00000411355 107 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RNU2-6P-201ENST00000411404 190 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RPS29P4-201ENST00000414733 161 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AL513174.1-201ENST00000423182 629 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RPL21P110-201ENST00000433345 446 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RPL7P29-201ENST00000437151 728 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC239367.2-201ENST00000447309 705 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 HMGN2P21-201ENST00000447764 270 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC097262.1-201ENST00000452559 548 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RPL23AP67-201ENST00000465341 474 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC078817.1-201ENST00000492623 435 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 IGKV2-26-201ENST00000518305 343 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 MIR3158-1-201ENST00000583596 81 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC022146.1-201ENST00000595307 847 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC245389.1-201ENST00000605141 529 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AC112503.1-201ENST00000608436 391 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AL392088.2-201ENST00000637607 285 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 AF127577.6-201ENST00000623352 2191 ntBASIC3.52□□□□□ -1.85
CSPG4P5Q96PW8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 HSPA8P19-201ENST00000505359 1517 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 MIR142-201ENST00000384835 87 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC007390.1-201ENST00000415722 356 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AL050321.1-201ENST00000432363 400 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AL138799.3-201ENST00000438968 350 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 SNORA84-201ENST00000459229 133 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 RPL5P23-201ENST00000496040 868 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 SNORA67.7-201ENST00000516664 135 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 OR4R3P-201ENST00000525084 838 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC025260.1-201ENST00000548858 430 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AL365503.1-201ENST00000605247 905 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 MIR8058-201ENST00000615737 89 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC009032.1-201ENST00000617574 431 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 AC127502.3-201ENST00000636170 1206 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CSPG4P5Q96PW8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSPG4P5Q96PW8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSPG4P5Q96PW8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSPG4P5Q96PW8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.5□□□□□ -1.85
CSPG4P5Q96PW8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSPG4P5Q96PW8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms