Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC026616.1-201ENST00000523157 525 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 PTP4A1P6-201ENST00000531034 478 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 CENPUP2-201ENST00000555897 1186 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 NTAN1P1-201ENST00000603150 646 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 LLPHP1-201ENST00000603571 367 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC022079.2-201ENST00000619739 566 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 CR392039.5-201ENST00000623201 510 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC083865.1-201ENST00000636634 831 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 ZNF285B-201ENST00000561698 1767 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL21A1Q96P44 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL21A1Q96P44 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL21A1Q96P44 OR5T3-201ENST00000303059 1023 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 ATP5A1P2-201ENST00000412323 255 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 RAB9AP3-201ENST00000412737 573 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 MTND4P22-201ENST00000413116 1169 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 RAB9AP1-201ENST00000449393 573 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC104689.1-201ENST00000473356 768 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC103833.1-201ENST00000517442 172 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 TRMT10BP1-201ENST00000519377 943 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AP000926.4-201ENST00000527351 454 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC004923.2-201ENST00000529649 369 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC004775.1-201ENST00000607389 753 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC069209.1-201ENST00000619282 651 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC119674.1-207ENST00000641355 633 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
COL21A1Q96P44 AC046144.1-201ENST00000478559 1853 ntBASIC3.34□□□□□ -1.87
COL21A1Q96P44 MFSD8-236ENST00000641509 4050 ntBASIC3.34□□□□□ -1.88
COL21A1Q96P44 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
COL21A1Q96P44 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL21A1Q96P44 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 XPOTP1-201ENST00000443317 2398 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL21A1Q96P44 MIR208A-201ENST00000362287 71 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 SNORA51.12-201ENST00000384448 134 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 PTMAP2-201ENST00000397627 327 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 U3.39-201ENST00000408569 239 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC069218.2-201ENST00000411665 344 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 RPS7P5-201ENST00000441482 581 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.33□□□□□ -1.88
COL21A1Q96P44 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
COL21A1Q96P44 RPL23AP62-201ENST00000463396 453 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms