Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 GLRXP1-201ENST00000423261 334 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 SNORD105B-201ENST00000458770 79 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 RPL6P9-201ENST00000466502 859 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC078817.1-201ENST00000492623 435 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC005726.1-201ENST00000494679 427 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 SNORA70.18-201ENST00000516696 98 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 RN7SKP234-201ENST00000517173 224 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AP001636.2-201ENST00000525517 696 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AL392112.1-201ENST00000605115 829 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC242628.1-201ENST00000606810 391 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 U3.45-201ENST00000607547 219 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC092354.2-201ENST00000607786 514 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC084757.4-201ENST00000616350 526 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC012314.7-201ENST00000619693 93 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 U4.6-201ENST00000621618 127 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
C9orf72Q96LT7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf72Q96LT7 AC007823.1-201ENST00000569932 1566 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 MTCO1P8-201ENST00000416914 1523 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AL049737.1-201ENST00000413920 1403 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 SEPT7P7-201ENST00000420492 1301 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 MIR208A-201ENST00000362287 71 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC069218.2-201ENST00000411665 344 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 RPS7P13-201ENST00000413955 498 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC244453.4-201ENST00000419150 388 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC010468.1-201ENST00000461022 817 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 RPL7P49-201ENST00000471402 708 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 RPL5P23-201ENST00000496040 868 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 SOD1P3-201ENST00000518682 454 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 MTND5P21-201ENST00000531961 522 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AP001542.1-201ENST00000591314 200 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC020914.6-201ENST00000594327 272 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AC015967.1-201ENST00000619893 476 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 AP003355.3-201ENST00000623465 114 ntBASIC3.55□□□□□ -1.84
C9orf72Q96LT7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf72Q96LT7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 RNU1-75P-201ENST00000347264 129 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 RNU6-98P-201ENST00000384173 107 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 MIR142-201ENST00000384835 87 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 MIR218-2-201ENST00000385006 110 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 MTATP6P31-201ENST00000406985 692 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 AL049610.1-201ENST00000423374 372 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf72Q96LT7 PPIAP3-201ENST00000450588 505 ntBASIC3.54□□□□□ -1.84
C9orf72Q96LT7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms