Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR4278-201ENST00000636094 69 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC117529.2-201ENST00000512159 2068 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 IPO8P1-201ENST00000455509 3109 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 FAM3C2-201ENST00000312214 681 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 RNU5B-4P-201ENST00000363508 111 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 RNU6-298P-201ENST00000390888 96 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC009237.2-201ENST00000421358 284 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 PTP4A1P7-201ENST00000423476 514 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC096638.2-201ENST00000434965 711 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC073143.1-201ENST00000436316 395 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 NUTF2P3-201ENST00000448540 384 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AL034418.1-201ENST00000448675 860 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC008427.1-201ENST00000503102 655 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 CYCSP29-201ENST00000533731 318 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC093519.1-201ENST00000566109 298 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC012182.1-201ENST00000570133 895 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AP002802.2-201ENST00000605877 235 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC023043.4-201ENST00000612081 449 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC112200.1-201ENST00000625015 234 ntBASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
PDLIM5Q96HC4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 Z82217.1-201ENST00000625157 8149 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 RNU11-4P-201ENST00000391149 133 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 RPL31P1-201ENST00000398116 372 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AL139098.1-201ENST00000407291 389 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC092638.1-201ENST00000411966 1275 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AL133384.1-201ENST00000412744 351 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC092647.1-201ENST00000420654 287 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AL356276.2-201ENST00000435919 558 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ELOCP13-201ENST00000443934 329 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 TRBV26-201ENST00000456572 344 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 GAPDHP39-201ENST00000481866 979 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 RPL7P24-201ENST00000493052 752 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AP001086.1-201ENST00000494882 321 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC118282.1-201ENST00000506408 765 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC109458.1-201ENST00000508858 316 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC010376.1-201ENST00000522101 334 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 AC021451.1-201ENST00000523498 1129 ntBASIC3.93□□□□□ -1.78
PDLIM5Q96HC4 ZNF705CP-201ENST00000530515 889 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms