Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 OR5AP1P-201ENST00000529730 940 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC026333.2-201ENST00000542164 106 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC007458.1-201ENST00000542812 373 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC005242.1-201ENST00000585658 438 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 U6.105-201ENST00000637379 88 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
ECHDC3Q96DC8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 ZNF90P1-201ENST00000480493 1951 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 ZNF965P-201ENST00000432501 817 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL159987.2-201ENST00000432754 307 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 MTCO3P16-201ENST00000454456 754 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 RPS3AP50-201ENST00000487064 803 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 SNORA48.9-201ENST00000516419 162 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 DUXAP2-201ENST00000519198 589 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 DUXAP6-201ENST00000553858 601 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 CENPUP2-201ENST00000555897 1186 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC018754.1-201ENST00000607486 925 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 MIR8058-201ENST00000615737 89 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 MIR4278-201ENST00000636094 69 ntBASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
ECHDC3Q96DC8 HSPA8P19-201ENST00000505359 1517 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 RNU4-35P-201ENST00000362588 141 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 MIR490-201ENST00000384865 128 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 RPS7P15-201ENST00000415804 584 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 FO393419.3-201ENST00000428741 282 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 USP9YP31-201ENST00000431405 881 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 MTND3P4-201ENST00000453537 303 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 SNRPGP3-201ENST00000469405 227 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC104689.1-201ENST00000473356 768 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC111193.1-201ENST00000504097 155 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 SLC25A15P5-201ENST00000508033 253 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC008494.2-201ENST00000514544 370 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC008562.1-201ENST00000521763 330 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC015849.2-201ENST00000605738 409 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 AC009501.3-201ENST00000605001 1352 ntBASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
ECHDC3Q96DC8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.49□□□□□ -1.85
ECHDC3Q96DC8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms