Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.64□□□□□ -1.35
HLA-CQ95604 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
HLA-CQ95604 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 Y_RNA.60-201ENST00000362831 98 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 RNU6-1284P-201ENST00000363701 100 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 RNU1-130P-201ENST00000363930 160 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.64□□□□□ -1.35
HLA-CQ95604 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 RPL12P34-201ENST00000424532 479 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 RPL7P37-201ENST00000425095 738 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AP000936.3-201ENST00000438127 255 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.64□□□□□ -1.35
HLA-CQ95604 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-CQ95604 PPIAP3-201ENST00000450588 505 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AC005008.1-201ENST00000456151 612 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-CQ95604 AC022206.1-201ENST00000495947 347 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AC114801.2-201ENST00000503825 781 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 NDUFB5P1-201ENST00000508134 564 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-CQ95604 RNU6-798P-201ENST00000516912 103 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.64□□□□□ -1.35
HLA-CQ95604 DYNLL1P4-201ENST00000549314 266 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-CQ95604 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HLA-CQ95604 AC005332.4-201ENST00000592752 579 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 COX6CP7-201ENST00000597056 208 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 AL391262.1-201ENST00000556558 1992 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.64□□□□□ -1.35
HLA-CQ95604 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
HLA-CQ95604 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 RNU6-188P-201ENST00000364207 107 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 RNU6-434P-201ENST00000384376 107 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 RNU6-95P-201ENST00000384697 107 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AL445189.1-201ENST00000405722 338 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 RN7SKP271-201ENST00000410528 320 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 FTH1P10-202ENST00000430907 550 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 PTMAP6-201ENST00000439110 327 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC011816.1-201ENST00000441346 546 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC105399.1-202ENST00000447303 205 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 RPL23AP60-201ENST00000450011 454 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL353691.1-201ENST00000451332 387 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL353752.1-201ENST00000454946 260 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 RN7SL860P-201ENST00000473738 223 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 COL6A4P1-202ENST00000487147 4317 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 CEACAMP10-202ENST00000495431 496 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 RN7SL466P-201ENST00000497546 295 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AC096745.1-201ENST00000509945 370 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC100870.1-201ENST00000522035 505 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AP000648.1-201ENST00000529682 397 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.63□□□□□ -1.35
HLA-CQ95604 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-CQ95604 MIR4293-201ENST00000584305 78 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC008521.1-201ENST00000587471 187 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL670379.6-201ENST00000603753 252 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AC008162.1-201ENST00000604718 254 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL670379.1-201ENST00000604752 252 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL670379.5-201ENST00000605253 252 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL670379.8-201ENST00000605353 252 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL670379.7-201ENST00000605823 252 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms