Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 RNU5A-6P-201ENST00000384136 116 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 RNU6-178P-201ENST00000384631 104 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
DDX1Q92499 RPL21P67-201ENST00000402896 478 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 U3.32-201ENST00000408116 212 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 MIR1182-201ENST00000408363 97 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 RN7SKP56-201ENST00000410513 331 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.52□□□□□ -1.53
DDX1Q92499 RPL12P18-201ENST00000437175 325 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 UBE2V1P3-201ENST00000439651 417 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 Z92846.1-201ENST00000456203 268 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 RPS3AP41-201ENST00000462701 778 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC006499.2-201ENST00000513470 337 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC008127.2-201ENST00000549925 1075 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.52□□□□□ -1.53
DDX1Q92499 NMNAT1P1-201ENST00000554095 876 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC114947.2-201ENST00000565748 2125 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC115286.1-201ENST00000604298 434 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AL049634.3-201ENST00000604968 457 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC131902.3-201ENST00000611767 581 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC078899.5-201ENST00000612475 178 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.52□□□□□ -1.53
DDX1Q92499 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC004817.4-201ENST00000602396 3625 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.52□□□□□ -1.53
DDX1Q92499 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.51□□□□□ -1.53
DDX1Q92499 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.51□□□□□ -1.53
DDX1Q92499 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 Y_RNA.9-201ENST00000362354 101 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 RNA5SP223-201ENST00000365174 120 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
DDX1Q92499 RPS3AP9-201ENST00000417027 792 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AL158073.1-201ENST00000426848 1104 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AL353597.2-202ENST00000434901 373 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 SNRPEP7-201ENST00000438350 220 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 DPPA3P1-201ENST00000448050 469 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 MEMO1P3-201ENST00000459811 302 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 APOOP2-201ENST00000461561 539 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC092324.1-201ENST00000468671 324 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC087879.1-201ENST00000474343 374 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.51□□□□□ -1.53
DDX1Q92499 RNU6-358P-201ENST00000516564 75 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC012400.1-201ENST00000518452 381 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.51□□□□□ -1.53
DDX1Q92499 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC022432.1-201ENST00000595739 310 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC234771.5-201ENST00000600161 514 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC005191.1-201ENST00000603950 358 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC009159.1-201ENST00000618386 642 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 FRG1KP-201ENST00000623592 341 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
DDX1Q92499 AC005005.4-201ENST00000623789 16698 ntBASIC5.51□□□□□ -1.53
DDX1Q92499 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
DDX1Q92499 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.51□□□□□ -1.53
DDX1Q92499 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
DDX1Q92499 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms