Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 ARL2BPP4-201ENST00000506854 471 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC010460.1-201ENST00000507087 466 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 OR5M2P-201ENST00000529003 936 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 PCNPP1-201ENST00000552501 511 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC012065.4-201ENST00000602445 679 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC133644.2-201ENST00000608142 540 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC107214.2-201ENST00000608204 634 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 Z99129.1-201ENST00000612510 255 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 MIR6719-201ENST00000622428 87 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL356596.1-201ENST00000624230 379 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 CYP1D1P-201ENST00000416662 1433 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 OR4A15-201ENST00000314706 1035 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RNU6-657P-201ENST00000383904 107 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 MIR105-2-201ENST00000385083 81 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL078595.1-201ENST00000404458 226 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 VDAC1P6-201ENST00000430062 855 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RPEP2-201ENST00000432149 701 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL627308.1-201ENST00000435693 821 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RPL23AP93-201ENST00000440847 484 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL357520.1-201ENST00000441557 453 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 TPT1P7-201ENST00000458300 517 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC004453.1-201ENST00000487895 408 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 OR5M14P-201ENST00000506803 618 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 STMN1P2-201ENST00000508435 439 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC116347.2-201ENST00000514912 523 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RPS27AP18-201ENST00000515536 459 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 SOD1P3-201ENST00000518682 454 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 IGHV3-32-201ENST00000519182 355 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC090502.2-201ENST00000549267 280 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RN7SL176P-201ENST00000580352 264 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 NDUFA8P1-201ENST00000605525 367 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC231657.1-201ENST00000624313 397 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 AC093775.1-201ENST00000624154 1868 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 ZNF137P-201ENST00000456718 1920 ntBASIC4.66□□□□□ -1.66
ATG4AQ8WYN0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 OR4G11P-202ENST00000642116 1414 ntBASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.65□□□□□ -1.66
ATG4AQ8WYN0 OR10J6P-201ENST00000289731 930 ntBASIC4.65□□□□□ -1.67
ATG4AQ8WYN0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
ATG4AQ8WYN0 AC067945.1-201ENST00000342609 618 ntBASIC4.65□□□□□ -1.67
ATG4AQ8WYN0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms