Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 RNU6-670P-201ENST00000364312 104 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 RNU6-650P-201ENST00000365658 111 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL034374.1-201ENST00000406329 351 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL031121.1-201ENST00000406553 254 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 SETP15-201ENST00000412724 337 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 BX323014.1-201ENST00000412876 237 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 LIPT1P1-201ENST00000415870 1186 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC005005.2-201ENST00000420779 380 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL009048.1-201ENST00000450437 298 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC112673.1-201ENST00000513168 575 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 IGKV2-26-201ENST00000518305 343 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 MIR5680-201ENST00000577577 84 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC022022.2-201ENST00000602989 360 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 LINC00216-201ENST00000623548 1126 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC091905.1-201ENST00000624400 311 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL353743.1-202ENST00000431724 1695 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC009313.2-201ENST00000417893 1941 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC090971.4-201ENST00000560291 1800 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 MFSD8-233ENST00000641482 4860 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNED1Q8TER0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC093719.1-202ENST00000392735 373 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 HIGD1AP15-201ENST00000416198 280 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 XKRYP1-201ENST00000423438 492 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 XKRYP2-201ENST00000432915 492 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 MTCYBP29-201ENST00000436327 1006 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 CACYBPP1-201ENST00000438592 684 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 YWHAQP9-201ENST00000445891 512 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AL671855.1-201ENST00000446875 1203 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 FTH1P24-201ENST00000503502 462 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 RNU6-579P-201ENST00000516879 102 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 OSBPL9P3-201ENST00000534523 595 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC005476.1-201ENST00000554427 397 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 AL049844.2-201ENST00000604280 628 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 Z94722.1-201ENST00000604328 474 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC122108.2-201ENST00000611946 526 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC024023.1-201ENST00000624530 922 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC132825.7-201ENST00000638744 335 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 AC026523.2-201ENST00000625039 7739 ntBASIC4.31□□□□□ -1.72
SNED1Q8TER0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNED1Q8TER0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNED1Q8TER0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.31□□□□□ -1.72
SNED1Q8TER0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL357075.1-201ENST00000404107 726 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 HNRNPDP2-201ENST00000406475 478 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 RN7SKP247-201ENST00000411094 308 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 RNA5SP39-201ENST00000411245 120 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.3□□□□□ -1.72
SNED1Q8TER0 BTF3P9-201ENST00000418784 283 ntBASIC4.3□□□□□ -1.72
SNED1Q8TER0 AC099336.2-201ENST00000422457 254 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms