Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MIR4276-201ENST00000584832 70 ntBASIC2.6□□□□□ -1.99
TTC9CQ8N5M4 AC008507.1-201ENST00000587506 734 ntBASIC2.6□□□□□ -1.99
TTC9CQ8N5M4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
TTC9CQ8N5M4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 MIR449B-201ENST00000384995 97 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 HMGN1P24-201ENST00000412282 298 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC245052.5-201ENST00000416320 649 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 OR1AA1P-201ENST00000419597 916 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC093151.1-201ENST00000427711 313 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 BX890604.2-201ENST00000427883 474 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 MTCO3P21-201ENST00000430791 643 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 HMGN2P20-201ENST00000437531 273 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 Z95327.1-201ENST00000446082 482 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 RN7SL293P-201ENST00000481765 281 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 SNORA67.7-201ENST00000516664 135 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC007536.1-201ENST00000533382 349 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC007458.1-201ENST00000542812 373 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC005476.1-201ENST00000554427 397 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AL157817.1-201ENST00000614264 790 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 AL590240.3-201ENST00000621416 943 ntBASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC9CQ8N5M4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.59□□□□□ -2
TTC9CQ8N5M4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.59□□□□□ -2
TTC9CQ8N5M4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 MTND4LP21-201ENST00000415303 295 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 HSFY4P-201ENST00000415994 1181 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC009965.2-201ENST00000425328 970 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL590103.1-201ENST00000434488 307 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 YWHAZP7-201ENST00000436906 631 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 CYCSP35-201ENST00000451978 304 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 PLGLA-201ENST00000465668 449 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AL672167.3-201ENST00000465951 960 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AP002812.1-201ENST00000495378 474 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC023050.1-201ENST00000498198 304 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC104027.1-201ENST00000521887 300 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 SYF2P1-201ENST00000550658 413 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC011611.1-201ENST00000552179 197 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC092868.3-201ENST00000560515 784 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 MIR4474-201ENST00000579189 78 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC073657.2-201ENST00000605661 303 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC006133.1-201ENST00000617106 264 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 AC004972.1-201ENST00000623934 2209 ntBASIC2.58□□□□□ -2
TTC9CQ8N5M4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC9CQ8N5M4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.58□□□□□ -2
TTC9CQ8N5M4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TTC9CQ8N5M4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.57□□□□□ -2
TTC9CQ8N5M4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
TTC9CQ8N5M4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TTC9CQ8N5M4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TTC9CQ8N5M4 RNU1-70P-201ENST00000362618 164 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 RNU1-33P-201ENST00000364249 162 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.57□□□□□ -2
TTC9CQ8N5M4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.57□□□□□ -2
TTC9CQ8N5M4 AC244505.4-201ENST00000434905 287 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 SSXP5-201ENST00000443473 287 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 GAPDHP27-201ENST00000447427 1020 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 SNORA84-201ENST00000459229 133 ntBASIC2.57□□□□□ -2
TTC9CQ8N5M4 RPL21P10-201ENST00000463521 490 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms