Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DSTNP4-201ENST00000399472 474 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL136231.1-201ENST00000429407 730 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 RPS3AP54-201ENST00000435535 734 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC104850.1-201ENST00000435940 476 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL389915.2-201ENST00000454576 441 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC079168.1-201ENST00000458741 345 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 RN7SL610P-201ENST00000463845 291 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 RN7SL727P-201ENST00000482164 296 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC008953.1-201ENST00000497334 318 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC097173.1-201ENST00000505862 819 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC012400.1-201ENST00000518452 381 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC127381.1-201ENST00000555979 939 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 HMGN2P47-201ENST00000559378 272 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC114947.2-201ENST00000565748 2125 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC107954.1-201ENST00000565906 727 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MIR3691-201ENST00000578066 90 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC011840.5-201ENST00000582125 771 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC012507.3-201ENST00000603556 477 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC055876.5-201ENST00000605667 259 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 COX6CP4-201ENST00000605798 228 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MIR98-201ENST00000606724 119 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL136295.6-201ENST00000610486 658 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AL121757.2-201ENST00000611223 313 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC037198.3-201ENST00000616754 526 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.58
TRIM48Q8IWZ4 OR5J1P-201ENST00000313544 939 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RPL23AP57-201ENST00000332361 466 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 Y_RNA.46-201ENST00000362695 102 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-343P-201ENST00000364709 104 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-1011P-201ENST00000384668 107 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 MIR649-201ENST00000384843 97 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AL356776.1-201ENST00000406574 447 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC127391.1-201ENST00000411737 98 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 GPS2P1-201ENST00000411761 986 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC211486.3-201ENST00000412694 621 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RPL23AP27-201ENST00000415161 451 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AL353193.1-201ENST00000421444 268 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 PTMAP6-201ENST00000439110 327 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 CEACAMP7-201ENST00000444105 496 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RPL36AP15-201ENST00000444514 266 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC132479.1-201ENST00000449160 144 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC022431.1-201ENST00000450941 438 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 MTND1P12-201ENST00000455231 147 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC009127.1-201ENST00000467090 155 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RPS29P25-201ENST00000481709 171 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC058823.1-201ENST00000485315 474 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 SNRPCP2-201ENST00000504370 475 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 HMGN1P9-201ENST00000515212 298 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-445P-201ENST00000516949 107 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 COX6CP8-201ENST00000522620 226 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 OR5BC1P-201ENST00000529327 739 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 EIF4A2P5-201ENST00000529914 499 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC090515.3-201ENST00000560431 315 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms