Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC010735.1-201ENST00000567305 1026 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC067852.3-201ENST00000589177 561 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC016911.1-201ENST00000613297 452 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC005156.1-201ENST00000613371 573 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AL121772.2-201ENST00000614331 297 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 ZNF285B-201ENST00000561698 1767 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AL365440.1-201ENST00000436135 2167 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 RNU1-75P-201ENST00000347264 129 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 RNA5SP295-201ENST00000362655 121 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC083799.1-201ENST00000366451 910 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 SNORA5A-201ENST00000384111 134 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 LIPT1P1-201ENST00000415870 1186 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AL356968.1-201ENST00000416622 474 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 RPS15AP29-201ENST00000445539 400 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AP002345.1-201ENST00000456493 928 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 TRBV8-2-201ENST00000475637 270 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 RPL31P13-201ENST00000484151 370 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 SAP18P1-201ENST00000512058 390 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC067805.1-201ENST00000559344 470 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC006130.2-201ENST00000586202 326 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC115085.1-201ENST00000588924 229 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AC092184.1-201ENST00000625042 715 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 AL645937.1-201ENST00000641739 1652 ntBASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL3Q8IVW4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RNA5SP124-201ENST00000362739 110 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 MIR23B-201ENST00000384832 97 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RN7SKP111-201ENST00000410349 271 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RPL31P2-201ENST00000413849 377 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 MTND2P16-201ENST00000419987 799 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 GLRXP1-201ENST00000423261 334 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AL160175.1-201ENST00000428124 247 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC007389.2-201ENST00000434630 306 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 MRPS33P4-201ENST00000434892 317 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 SNORA84-201ENST00000459229 133 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC112198.1-201ENST00000505369 1220 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 HMGB3P15-201ENST00000507326 574 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 HMGB1P47-201ENST00000511281 589 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RN7SKP13-201ENST00000515933 244 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 SNORA48.9-201ENST00000516419 162 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RPL12P22-201ENST00000519073 490 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 OR6C73P-201ENST00000546432 358 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 MIMT1-201ENST00000597105 1050 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 BNIP3P33-201ENST00000598912 569 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC069304.3-201ENST00000603938 1084 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms