Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 Y_RNA.625-201ENST00000411256 107 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL035407.2-201ENST00000454090 378 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC146507.1-201ENST00000468335 354 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 RN7SL330P-201ENST00000469709 307 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 RPL7P19-201ENST00000469948 618 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 HMGB3P15-201ENST00000507326 574 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC025768.1-201ENST00000510057 267 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 RPL7L1P13-201ENST00000511702 739 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 OSBPL9P3-201ENST00000534523 595 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL442163.2-201ENST00000553912 710 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC104229.1-201ENST00000561364 255 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC090312.2-201ENST00000582687 378 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC011492.1-201ENST00000600023 315 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 RMST_10.1-201ENST00000616309 154 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC091948.2-201ENST00000636510 279 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AL590396.2-201ENST00000636511 1041 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 MTND5P3-201ENST00000438536 1800 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 SEC63P2-201ENST00000503863 1939 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 NUP35P2-201ENST00000416748 943 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL139247.1-201ENST00000422768 325 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL513174.1-201ENST00000423182 629 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC073310.1-201ENST00000423226 1033 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 OR8F1P-201ENST00000425243 930 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 OR4F13P-201ENST00000428478 931 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL590762.3-201ENST00000436372 640 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 CYCSP43-201ENST00000438233 310 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC114755.5-201ENST00000447760 831 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AP000893.1-201ENST00000474462 794 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 SETP14-201ENST00000497538 873 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 MIR2276-201ENST00000516886 89 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 MTND2P26-201ENST00000528255 1029 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 RNU1-30P-201ENST00000606575 163 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC092653.1-201ENST00000608509 531 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC005344.1-201ENST00000613391 459 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC073569.3-201ENST00000619055 682 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AC048347.1-201ENST00000624621 427 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 FAM91A3P-201ENST00000456826 2544 ntBASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUDCD3Q8IVD9 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 AP004289.2-201ENST00000444413 1457 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 AL512646.1-201ENST00000269395 1077 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 RNA5SP189-201ENST00000364920 115 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 MIR30B-201ENST00000384850 88 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 RPL7P60-201ENST00000397636 735 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 SKINT1L-201ENST00000401057 817 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 RNU4-27P-201ENST00000410889 139 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 RNA5SP107-201ENST00000411358 122 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 RPS7P13-201ENST00000413955 498 ntBASIC3.49□□□□□ -1.85
NUDCD3Q8IVD9 AC093578.1-201ENST00000415219 368 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms