Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KPNA2P3-201ENST00000584190 848 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL512782.1-201ENST00000603093 364 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL596327.1-201ENST00000603629 213 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC092140.2-201ENST00000618027 521 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 KARSP3-201ENST00000571212 1504 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AL356489.2-201ENST00000566968 3528 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC011155.1-201ENST00000316512 456 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 RPL21P132-201ENST00000331267 462 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 SNORA51.1-201ENST00000363243 140 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 Y_RNA.302-201ENST00000364997 102 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 SNORA26.8-201ENST00000391306 124 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC073264.1-201ENST00000411508 416 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 RAC1P3-201ENST00000416129 580 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AL158073.1-201ENST00000426848 1104 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 HLA-N-201ENST00000437516 135 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC092473.1-201ENST00000441098 221 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 VN1R10P-201ENST00000447106 875 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 RPL39P6-201ENST00000448289 150 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC079804.1-201ENST00000461922 436 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 RN7SL629P-201ENST00000489622 285 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC110792.2-201ENST00000510278 224 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC006499.2-201ENST00000513470 337 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 MTCYBP43-201ENST00000513621 740 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC106038.2-201ENST00000520706 568 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC009117.1-201ENST00000563948 554 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 MTCYBP28-201ENST00000566728 1132 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 ROCK1P1-201ENST00000573767 549 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 MIR3667-201ENST00000581025 74 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC083899.3-201ENST00000603413 594 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 Z98200.1-201ENST00000607298 470 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC243773.3-201ENST00000613270 256 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC018816.2-201ENST00000621460 353 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC008443.7-201ENST00000622195 246 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC079228.1-201ENST00000624774 1049 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 CASC19-222ENST00000641321 1173 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHFQ7M4L6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.03□□□□□ -1.76
SHFQ7M4L6 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
SHFQ7M4L6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHFQ7M4L6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHFQ7M4L6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHFQ7M4L6 AL672167.1-206ENST00000356293 943 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 RNU6-433P-201ENST00000363216 104 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 RNU4-24P-201ENST00000364565 139 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 RNU6-660P-201ENST00000364566 109 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHFQ7M4L6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 TPMTP3-201ENST00000411928 735 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 RPL7P8-201ENST00000411964 730 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 RPL23AP39-201ENST00000415533 405 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.02□□□□□ -1.77
SHFQ7M4L6 RPS12P10-201ENST00000427031 377 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 RPEP2-201ENST00000432149 701 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 AC010153.1-201ENST00000432862 727 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.02□□□□□ -1.77
SHFQ7M4L6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms