Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL136964.1-201ENST00000622038 2990 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 RNU6-105P-201ENST00000363909 104 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 TRIM60P13-201ENST00000432350 1283 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 RN7SKP46-201ENST00000515942 234 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC090151.1-201ENST00000520784 730 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC010306.1-201ENST00000523223 1117 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 LSM3P2-201ENST00000551246 273 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC126177.3-201ENST00000551839 688 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL049874.4-201ENST00000557593 255 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC005730.3-201ENST00000583067 366 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 MIR6817-201ENST00000615588 66 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC063952.1-203ENST00000634410 658 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 MIR22-201ENST00000362190 85 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL137014.1-201ENST00000420490 1226 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL049874.2-201ENST00000492636 288 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC018630.1-201ENST00000541376 925 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC009163.5-201ENST00000575421 637 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC000367.1-201ENST00000452711 1766 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 NMD3P1-201ENST00000439704 1488 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 RPS3AP9-201ENST00000417027 792 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 RPL23AP65-201ENST00000475608 468 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC107934.2-201ENST00000518653 310 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 SERPINE4P-201ENST00000554978 281 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 UBTFL3-201ENST00000418934 1024 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 MTCO3P16-201ENST00000454456 754 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 UBTFL6-201ENST00000477929 1024 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC021087.2-201ENST00000504656 1203 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AP001542.2-201ENST00000593141 364 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC233280.2-201ENST00000603917 1070 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 SNORA51.12-201ENST00000384448 134 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AL645937.1-202ENST00000421799 937 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 HIGD1AP12-201ENST00000427832 281 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC007677.1-201ENST00000445757 515 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 IGLV3-17-201ENST00000519099 244 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AL109741.3-201ENST00000561748 592 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 NRBF2P1-201ENST00000587407 859 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC128687.1-201ENST00000605304 619 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC026333.2-201ENST00000542164 106 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AL049555.1-201ENST00000562834 1933 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms