Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AL139174.1-201ENST00000531489 886 ntBASIC3.08□□□□□ -1.92
USF2Q15853 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.08□□□□□ -1.92
USF2Q15853 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 AC092470.1-201ENST00000546187 132 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 CYP2C60P-201ENST00000566088 139 ntBASIC3.08□□□□□ -1.92
USF2Q15853 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
USF2Q15853 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 AC006116.5-201ENST00000591936 559 ntBASIC3.08□□□□□ -1.92
USF2Q15853 XIAPP1-201ENST00000603162 600 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC073387.2-201ENST00000604797 784 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC079610.2-201ENST00000604818 690 ntBASIC3.08□□□□□ -1.92
USF2Q15853 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 MIR6758-201ENST00000620653 63 ntBASIC3.08□□□□□ -1.92
USF2Q15853 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 AC006111.3-201ENST00000622137 383 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC095031.1-201ENST00000623685 672 ntBASIC3.08□□□□□ -1.92
USF2Q15853 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 AL136520.1-201ENST00000600311 1322 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC005261.4-201ENST00000600047 1385 ntBASIC3.08□□□□□ -1.92
USF2Q15853 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.08□□□□□ -1.92
USF2Q15853 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.08□□□□□ -1.92
USF2Q15853 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
USF2Q15853 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USF2Q15853 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
USF2Q15853 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USF2Q15853 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 SNORA51.12-201ENST00000384448 134 ntBASIC3.07□□□□□ -1.92
USF2Q15853 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USF2Q15853 RN7SKP33-201ENST00000410942 340 ntBASIC3.07□□□□□ -1.92
USF2Q15853 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
USF2Q15853 TPT1P2-201ENST00000413105 503 ntBASIC3.07□□□□□ -1.92
USF2Q15853 MTCO3P12-201ENST00000416718 547 ntBASIC3.07□□□□□ -1.92
USF2Q15853 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 OFD1P18Y-201ENST00000420889 959 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC091390.1-201ENST00000433904 331 ntBASIC3.07□□□□□ -1.92
USF2Q15853 KCTD9P3-201ENST00000434597 1169 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 RPS26P56-201ENST00000444468 240 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 RPS29P31-201ENST00000446147 164 ntBASIC3.07□□□□□ -1.92
USF2Q15853 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.07□□□□□ -1.92
USF2Q15853 AC104472.2-201ENST00000469035 601 ntBASIC3.07□□□□□ -1.92
USF2Q15853 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 GAPDHP39-201ENST00000481866 979 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC068587.1-201ENST00000483613 781 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC105137.1-201ENST00000484355 562 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC026979.1-201ENST00000492525 396 ntBASIC3.07□□□□□ -1.92
USF2Q15853 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 AC008565.1-201ENST00000509046 885 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC106806.2-201ENST00000509365 500 ntBASIC3.07□□□□□ -1.92
USF2Q15853 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 RNU6-760P-201ENST00000516078 97 ntBASIC3.07□□□□□ -1.92
USF2Q15853 SNORA26.10-201ENST00000516427 141 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.07□□□□□ -1.92
USF2Q15853 CIR1P1-201ENST00000524055 1133 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC092747.2-201ENST00000545069 983 ntBASIC3.07□□□□□ -1.92
USF2Q15853 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC034268.2-201ENST00000571784 482 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 AC017100.2-201ENST00000584628 355 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.07□□□□□ -1.92
USF2Q15853 AC092474.3-201ENST00000603022 568 ntBASIC3.07□□□□□ -1.92
USF2Q15853 ARF4P1-201ENST00000605447 541 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 AL445423.1-201ENST00000609941 536 ntBASIC3.07□□□□□ -1.92
USF2Q15853 MIR6868-201ENST00000611215 58 ntBASIC3.07□□□□□ -1.92
USF2Q15853 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.07□□□□□ -1.92
USF2Q15853 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.07□□□□□ -1.92
USF2Q15853 API5P2-201ENST00000397055 1498 ntBASIC3.07□□□□□ -1.92
USF2Q15853 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USF2Q15853 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
USF2Q15853 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.06□□□□□ -1.92
USF2Q15853 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USF2Q15853 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.06□□□□□ -1.92
USF2Q15853 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
USF2Q15853 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
USF2Q15853 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.06□□□□□ -1.92
USF2Q15853 RNA5SP399-201ENST00000364003 117 ntBASIC3.06□□□□□ -1.92
USF2Q15853 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms