Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC133473.1-201ENST00000455173 299 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC011602.1-201ENST00000546484 331 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC099506.2-201ENST00000623074 221 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC139713.2-210ENST00000641741 992 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 RN7SKP220-201ENST00000410611 288 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 CST9LP2-201ENST00000437612 320 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 MTND4LP12-201ENST00000448237 295 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 PDCD5P1-201ENST00000543528 309 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC024153.1-201ENST00000603103 365 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 SAGE4P-201ENST00000442271 3381 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
CACNA1SQ13698 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1SQ13698 AC096644.4-201ENST00000563417 2912 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CACNA1SQ13698 MIR22-201ENST00000362190 85 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 AL121890.1-201ENST00000435457 205 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 AL121877.1-201ENST00000453704 622 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 AC021146.1-201ENST00000511202 716 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 MTCYBP19-201ENST00000517463 1124 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1SQ13698 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1SQ13698 CR382285.2-201ENST00000624662 1495 ntBASIC3.78□□□□□ -1.8
CACNA1SQ13698 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA1SQ13698 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1SQ13698 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 RPS26P40-201ENST00000435209 294 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 RPL32P28-201ENST00000443577 397 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 RPL31P50-201ENST00000471002 296 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 H3F3AP1-201ENST00000559984 334 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC136601.2-201ENST00000604356 474 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AL158196.1-201ENST00000616786 434 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 MTCO1P8-201ENST00000416914 1523 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 NCSTNP1-201ENST00000406229 144 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC127526.1-201ENST00000417526 366 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC022018.1-201ENST00000430685 241 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AL138787.1-202ENST00000437804 898 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 snoU109.6-201ENST00000516831 118 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC079600.2-201ENST00000550076 130 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 AC018552.3-201ENST00000567416 561 ntBASIC3.77□□□□□ -1.81
CACNA1SQ13698 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CACNA1SQ13698 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1SQ13698 AP003122.5-201ENST00000527668 3766 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 DUTP6-201ENST00000425573 462 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC069540.1-201ENST00000446320 988 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 SLC31A1P1-201ENST00000451221 567 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 PRDX3P4-201ENST00000470828 747 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC098583.1-201ENST00000480875 255 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CACNA1SQ13698 SNORA31.21-201ENST00000517180 77 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC109329.2-201ENST00000519658 482 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CACNA1SQ13698 AC000403.1-201ENST00000613696 3585 ntBASIC3.76□□□□□ -1.81
CACNA1SQ13698 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CACNA1SQ13698 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms