Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 AL109941.1-201ENST00000401925 229 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN1BQ07699 RNU6-712P-201ENST00000410558 100 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 RPS20P14-201ENST00000412545 360 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 MTCO3P12-201ENST00000416718 547 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN1BQ07699 VN1R54P-201ENST00000435210 1049 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 RPL12P3-201ENST00000440080 396 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 snoU13.24-201ENST00000458998 104 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 RPL23AP44-201ENST00000482216 473 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC083982.1-201ENST00000485679 344 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 MTND4LP2-201ENST00000502312 285 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 HMGB3P15-201ENST00000507326 574 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC026412.2-201ENST00000512270 1075 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN1BQ07699 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SCN1BQ07699 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 OR10V3P-201ENST00000525712 725 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AL121603.1-201ENST00000553815 142 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC087481.2-201ENST00000565492 330 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.81□□□□□ -1.8
SCN1BQ07699 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 AC015688.2-201ENST00000584523 262 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC110741.2-201ENST00000605278 268 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AL138478.1-201ENST00000612252 832 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 MIR7702-201ENST00000621931 59 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 U6.101-201ENST00000637707 76 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 LINC02211-204ENST00000642024 1070 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 AC244517.1-201ENST00000606030 2086 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 BDP1P-201ENST00000582658 1990 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 AL133383.2-201ENST00000622958 2336 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN1BQ07699 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN1BQ07699 RNU6-216P-201ENST00000363282 104 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 Y_RNA.408-201ENST00000383987 102 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC092447.6-201ENST00000414578 210 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 SNRPFP1-201ENST00000414761 252 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 CYP4F29P-201ENST00000420685 446 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 NANOGP2-201ENST00000435391 727 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AC092427.1-201ENST00000439177 601 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN1BQ07699 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 RN7SKP31-201ENST00000516354 278 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN1BQ07699 EEF1B2P4-201ENST00000551398 348 ntBASIC3.8□□□□□ -1.8
SCN1BQ07699 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN1BQ07699 AL160237.3-201ENST00000604114 1013 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms