Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AP000919.1-202ENST00000581139 1264 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC113194.1-201ENST00000606037 500 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC245389.2-201ENST00000616023 576 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC243756.2-201ENST00000618406 463 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC242843.1-201ENST00000618702 573 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC000367.1-201ENST00000452711 1766 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 SNORA62.3-201ENST00000365110 153 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RNU6-98P-201ENST00000384173 107 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RNU6-796P-201ENST00000391086 107 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 HMGB1P10-201ENST00000395823 563 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RN7SKP285-201ENST00000410137 318 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AL138799.3-201ENST00000438968 350 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RNFT1P2-201ENST00000443064 757 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 Z95327.1-201ENST00000446082 482 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 RPS20P32-201ENST00000456044 356 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 SNORA84-201ENST00000459229 133 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC078817.1-201ENST00000492623 435 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC090071.1-201ENST00000507713 644 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RN7SKP234-201ENST00000517173 224 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 IGKV2-36-201ENST00000519999 223 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 GTF2IP22-201ENST00000554443 182 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC010591.1-201ENST00000603941 649 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 RNA5SP108-201ENST00000605921 117 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC024023.1-201ENST00000624530 922 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 SEPT7P7-201ENST00000420492 1301 ntBASIC3.34□□□□□ -1.87
HMGCS1Q01581 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HMGCS1Q01581 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HMGCS1Q01581 TNPO1P3-201ENST00000436471 2662 ntBASIC3.34□□□□□ -1.88
HMGCS1Q01581 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
HMGCS1Q01581 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HMGCS1Q01581 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMGCS1Q01581 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 RNU6-650P-201ENST00000365658 111 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL590290.1-201ENST00000405336 380 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 RNU2-37P-201ENST00000410695 177 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC097499.1-201ENST00000444277 208 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 ARL5AP2-201ENST00000444698 533 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 RPL37P3-201ENST00000456825 293 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 RPL5P23-201ENST00000496040 868 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 SNORA67.7-201ENST00000516664 135 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 SNORA76.2-201ENST00000517095 137 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms