Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SAGE4P-201ENST00000442271 3381 ntBASIC4.37□□□□□ -1.71
RAE1P78406 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 AC103591.2-201ENST00000265259 766 ntBASIC4.37□□□□□ -1.71
RAE1P78406 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
RAE1P78406 Y_RNA.359-201ENST00000365498 102 ntBASIC4.37□□□□□ -1.71
RAE1P78406 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RAE1P78406 AL645733.1-201ENST00000402250 217 ntBASIC4.37□□□□□ -1.71
RAE1P78406 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 RPL21P108-201ENST00000413857 481 ntBASIC4.37□□□□□ -1.71
RAE1P78406 MTCO1P21-201ENST00000416634 589 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 RPL7P30-201ENST00000420888 709 ntBASIC4.37□□□□□ -1.71
RAE1P78406 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 AL590609.2-201ENST00000421430 368 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.37□□□□□ -1.71
RAE1P78406 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 RPL12P34-201ENST00000424532 479 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 VN1R54P-201ENST00000435210 1049 ntBASIC4.37□□□□□ -1.71
RAE1P78406 MTND1P28-201ENST00000435623 950 ntBASIC4.37□□□□□ -1.71
RAE1P78406 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 AC091685.2-201ENST00000454924 864 ntBASIC4.37□□□□□ -1.71
RAE1P78406 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 AP000797.1-201ENST00000478870 387 ntBASIC4.37□□□□□ -1.71
RAE1P78406 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 RN7SL817P-201ENST00000480777 288 ntBASIC4.37□□□□□ -1.71
RAE1P78406 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 AC093270.2-201ENST00000486157 792 ntBASIC4.37□□□□□ -1.71
RAE1P78406 IGLV2-34-201ENST00000490007 283 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 NDUFA5P12-201ENST00000503796 343 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC021678.1-201ENST00000505195 936 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.37□□□□□ -1.71
RAE1P78406 ARL2BPP4-201ENST00000506854 471 ntBASIC4.37□□□□□ -1.71
RAE1P78406 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.37□□□□□ -1.71
RAE1P78406 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.37□□□□□ -1.71
RAE1P78406 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.37□□□□□ -1.71
RAE1P78406 AP001922.4-201ENST00000526967 290 ntBASIC4.37□□□□□ -1.71
RAE1P78406 OR4A45P-201ENST00000529954 901 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.37□□□□□ -1.71
RAE1P78406 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 CR383656.6-201ENST00000550518 394 ntBASIC4.37□□□□□ -1.71
RAE1P78406 RPL21P7-201ENST00000557463 483 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC091489.2-201ENST00000566263 604 ntBASIC4.37□□□□□ -1.71
RAE1P78406 UBE2FP2-201ENST00000566646 462 ntBASIC4.37□□□□□ -1.71
RAE1P78406 MIR4504-201ENST00000577413 92 ntBASIC4.37□□□□□ -1.71
RAE1P78406 MIR5186-201ENST00000577504 120 ntBASIC4.37□□□□□ -1.71
RAE1P78406 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 AC015908.5-201ENST00000623289 343 ntBASIC4.37□□□□□ -1.71
RAE1P78406 U3.53-201ENST00000628922 216 ntBASIC4.37□□□□□ -1.71
RAE1P78406 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.37□□□□□ -1.71
RAE1P78406 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.37□□□□□ -1.71
RAE1P78406 MTND4P26-201ENST00000415971 1359 ntBASIC4.37□□□□□ -1.71
RAE1P78406 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAE1P78406 AC131971.1-201ENST00000332881 1482 ntBASIC4.37□□□□□ -1.71
RAE1P78406 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RAE1P78406 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
RAE1P78406 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC021146.4-201ENST00000309229 279 ntBASIC4.36□□□□□ -1.71
RAE1P78406 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.36□□□□□ -1.71
RAE1P78406 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 SNORA51.6-201ENST00000384151 125 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC025750.1-201ENST00000399891 379 ntBASIC4.36□□□□□ -1.71
RAE1P78406 RPS24P12-201ENST00000402084 394 ntBASIC4.36□□□□□ -1.71
RAE1P78406 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAE1P78406 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.36□□□□□ -1.71
RAE1P78406 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.36□□□□□ -1.71
RAE1P78406 AC105402.2-201ENST00000438503 358 ntBASIC4.36□□□□□ -1.71
RAE1P78406 CEACAMP9-201ENST00000442990 513 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.36□□□□□ -1.71
RAE1P78406 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 MTCYBP1-201ENST00000454315 1119 ntBASIC4.36□□□□□ -1.71
RAE1P78406 RNU7-136P-201ENST00000458819 69 ntBASIC4.36□□□□□ -1.71
RAE1P78406 snoU13.7-201ENST00000459220 104 ntBASIC4.36□□□□□ -1.71
RAE1P78406 APOOP2-201ENST00000461561 539 ntBASIC4.36□□□□□ -1.71
RAE1P78406 AC104763.1-201ENST00000475274 360 ntBASIC4.36□□□□□ -1.71
RAE1P78406 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.36□□□□□ -1.71
RAE1P78406 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms