Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.96□□□□□ -2.1
RPL39P62891 AC068831.8-201ENST00000620171 435 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AL356863.1-201ENST00000623378 1080 ntBASIC1.96□□□□□ -2.1
RPL39P62891 CR381653.2-201ENST00000624041 768 ntBASIC1.96□□□□□ -2.1
RPL39P62891 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
RPL39P62891 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 AP003122.5-201ENST00000527668 3766 ntBASIC1.96□□□□□ -2.1
RPL39P62891 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.95□□□□□ -2.1
RPL39P62891 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
RPL39P62891 AP001148.1-201ENST00000624124 2359 ntBASIC1.95□□□□□ -2.1
RPL39P62891 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC1.95□□□□□ -2.1
RPL39P62891 AL355578.1-201ENST00000607405 1328 ntBASIC1.95□□□□□ -2.1
RPL39P62891 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPL39P62891 MIR26A1-201ENST00000362205 77 ntBASIC1.95□□□□□ -2.1
RPL39P62891 SNORA71.1-201ENST00000364523 117 ntBASIC1.95□□□□□ -2.1
RPL39P62891 RPL5P18-201ENST00000406671 891 ntBASIC1.95□□□□□ -2.1
RPL39P62891 RPS7P15-201ENST00000415804 584 ntBASIC1.95□□□□□ -2.1
RPL39P62891 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.95□□□□□ -2.1
RPL39P62891 AL513175.2-201ENST00000422071 443 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC007563.3-201ENST00000433233 371 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.95□□□□□ -2.1
RPL39P62891 AL513043.1-201ENST00000439124 535 ntBASIC1.95□□□□□ -2.1
RPL39P62891 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.95□□□□□ -2.1
RPL39P62891 BTF3P5-201ENST00000457252 467 ntBASIC1.95□□□□□ -2.1
RPL39P62891 RN7SL542P-201ENST00000467147 294 ntBASIC1.95□□□□□ -2.1
RPL39P62891 RPL27AP5-201ENST00000469428 449 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC126121.1-201ENST00000482313 553 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AP001086.1-201ENST00000494882 321 ntBASIC1.95□□□□□ -2.1
RPL39P62891 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPL39P62891 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.95□□□□□ -2.1
RPL39P62891 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.95□□□□□ -2.1
RPL39P62891 AC091826.1-201ENST00000514065 313 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC008885.1-201ENST00000514930 301 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC009812.2-201ENST00000517657 457 ntBASIC1.95□□□□□ -2.1
RPL39P62891 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC1.95□□□□□ -2.1
RPL39P62891 AC004486.1-201ENST00000546846 233 ntBASIC1.95□□□□□ -2.1
RPL39P62891 OR4T1P-201ENST00000554933 911 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC106785.1-201ENST00000565935 262 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC1.95□□□□□ -2.1
RPL39P62891 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.95□□□□□ -2.1
RPL39P62891 AC004832.5-201ENST00000608677 401 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC069200.1-201ENST00000609511 323 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AC243654.2-201ENST00000612843 443 ntBASIC1.95□□□□□ -2.1
RPL39P62891 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPL39P62891 AC026422.1-201ENST00000623961 452 ntBASIC1.95□□□□□ -2.1
RPL39P62891 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
RPL39P62891 AC009501.3-201ENST00000605001 1352 ntBASIC1.95□□□□□ -2.1
RPL39P62891 AL133383.2-201ENST00000622958 2336 ntBASIC1.95□□□□□ -2.1
RPL39P62891 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPL39P62891 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPL39P62891 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPL39P62891 RNA5SP479-201ENST00000364858 117 ntBASIC1.94□□□□□ -2.1
RPL39P62891 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 RNU6-178P-201ENST00000384631 104 ntBASIC1.94□□□□□ -2.1
RPL39P62891 MIR1193-201ENST00000408109 78 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC007064.3-201ENST00000422608 359 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPL39P62891 AL159987.2-201ENST00000432754 307 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 RPL29P29-201ENST00000448725 423 ntBASIC1.94□□□□□ -2.1
RPL39P62891 NIPA2P5-201ENST00000452282 464 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.94□□□□□ -2.1
RPL39P62891 AC090525.1-201ENST00000479116 478 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.94□□□□□ -2.1
RPL39P62891 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 AC023632.4-201ENST00000517783 191 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC104986.1-201ENST00000517978 436 ntBASIC1.94□□□□□ -2.1
RPL39P62891 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL39P62891 MIR3670-2-201ENST00000582974 65 ntBASIC1.94□□□□□ -2.1
RPL39P62891 SS18L2P2-201ENST00000583960 235 ntBASIC1.94□□□□□ -2.1
RPL39P62891 MIR3670-1-201ENST00000584160 65 ntBASIC1.94□□□□□ -2.1
RPL39P62891 MIR3670-3-201ENST00000584855 65 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AC078899.3-201ENST00000599065 212 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AL356575.1-201ENST00000603008 283 ntBASIC1.94□□□□□ -2.1
RPL39P62891 BNIP3P11-201ENST00000603878 563 ntBASIC1.94□□□□□ -2.1
RPL39P62891 BX664608.1-201ENST00000610519 487 ntBASIC1.94□□□□□ -2.1
RPL39P62891 MIR3670-4-201ENST00000612260 65 ntBASIC1.94□□□□□ -2.1
RPL39P62891 AP002967.1-201ENST00000624203 539 ntBASIC1.94□□□□□ -2.1
RPL39P62891 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RPL39P62891 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPL39P62891 MTCO1P12-201ENST00000414273 1543 ntBASIC1.94□□□□□ -2.1
RPL39P62891 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL39P62891 AL049781.1-201ENST00000623195 3585 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms