Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HMGB3P5-201ENST00000428894 612 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 AF228730.2-201ENST00000438784 848 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 RPL29P29-201ENST00000448725 423 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 PPIAP3-201ENST00000450588 505 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 AC069499.1-201ENST00000489433 509 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 RPS6P4-201ENST00000494693 758 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 TMEM248P1-201ENST00000510579 951 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 VWA8P1-201ENST00000510889 176 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC093755.1-201ENST00000512950 1023 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 OR4C2P-201ENST00000530855 1064 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.6□□□□□ -1.83
RPS4XP62701 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.6□□□□□ -1.83
RPS4XP62701 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL583856.2-201ENST00000606298 543 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 AL354760.1-201ENST00000608357 643 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AL592148.2-201ENST00000612210 372 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC104985.3-201ENST00000623479 597 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 AL445984.1-201ENST00000637834 659 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RPS4XP62701 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 DCAF13P1-201ENST00000495256 1330 ntBASIC3.6□□□□□ -1.83
RPS4XP62701 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
RPS4XP62701 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPS4XP62701 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RPS4XP62701 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RPS4XP62701 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 MIR217-201ENST00000384817 110 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 MIR122-201ENST00000385044 85 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 OR8G2P-201ENST00000412796 908 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 OR8F1P-201ENST00000425243 930 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 USP12PY-201ENST00000427677 1064 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS4XP62701 HMGB1P37-201ENST00000439613 609 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS4XP62701 NPM1P13-201ENST00000452663 865 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 SNORD108-201ENST00000459332 71 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS4XP62701 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 GAPDHP36-201ENST00000480688 918 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 CAB39P1-201ENST00000502277 460 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC146944.2-203ENST00000502493 354 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 AC093752.1-206ENST00000511823 336 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC010374.2-201ENST00000512933 535 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC139495.1-202ENST00000513164 354 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC104057.1-201ENST00000515547 497 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC122134.1-202ENST00000569111 1201 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS4XP62701 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS4XP62701 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC112220.2-201ENST00000605513 533 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AL451086.1-201ENST00000605596 223 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC090912.3-201ENST00000609775 533 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 AC006133.1-201ENST00000617106 264 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC084824.4-201ENST00000620106 731 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 AC087821.2-201ENST00000637086 450 ntBASIC3.59□□□□□ -1.83
RPS4XP62701 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS4XP62701 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPS4XP62701 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
RPS4XP62701 AC012020.1-201ENST00000624541 1728 ntBASIC3.58□□□□□ -1.84
RPS4XP62701 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RPS4XP62701 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPS4XP62701 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms