Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC009101.1-201ENST00000568135 242 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC099489.2-201ENST00000574976 260 ntBASIC3.95□□□□□ -1.78
PEX3P56589 MIR3922-201ENST00000585192 84 ntBASIC3.95□□□□□ -1.78
PEX3P56589 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 AC006116.10-201ENST00000591836 581 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AP003117.1-201ENST00000602771 554 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC112503.1-201ENST00000608436 391 ntBASIC3.95□□□□□ -1.78
PEX3P56589 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 AC104763.3-201ENST00000613765 618 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC009269.6-201ENST00000621778 588 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC015726.3-201ENST00000624501 418 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 AC004808.1-201ENST00000627671 721 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PEX3P56589 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PEX3P56589 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PEX3P56589 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
PEX3P56589 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 SEC63P2-201ENST00000503863 1939 ntBASIC3.94□□□□□ -1.78
PEX3P56589 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PEX3P56589 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PEX3P56589 RNU5B-4P-201ENST00000363508 111 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC234772.1-201ENST00000377927 937 ntBASIC3.94□□□□□ -1.78
PEX3P56589 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.94□□□□□ -1.78
PEX3P56589 RNU6-1000P-201ENST00000391066 106 ntBASIC3.94□□□□□ -1.78
PEX3P56589 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.94□□□□□ -1.78
PEX3P56589 UBE2V1P9-201ENST00000414760 368 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.94□□□□□ -1.78
PEX3P56589 AC069157.1-201ENST00000421749 137 ntBASIC3.94□□□□□ -1.78
PEX3P56589 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 RPL37P1-201ENST00000432310 284 ntBASIC3.94□□□□□ -1.78
PEX3P56589 SKP1P1-201ENST00000438081 489 ntBASIC3.94□□□□□ -1.78
PEX3P56589 ARF4P4-201ENST00000439608 520 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AL035407.2-201ENST00000454090 378 ntBASIC3.94□□□□□ -1.78
PEX3P56589 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 AC104687.1-201ENST00000485829 412 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC026414.1-201ENST00000504046 698 ntBASIC3.94□□□□□ -1.78
PEX3P56589 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.94□□□□□ -1.78
PEX3P56589 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.94□□□□□ -1.78
PEX3P56589 IGKV2D-19-201ENST00000523346 262 ntBASIC3.94□□□□□ -1.78
PEX3P56589 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.94□□□□□ -1.78
PEX3P56589 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PEX3P56589 POLR2KP1-201ENST00000553226 168 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.94□□□□□ -1.78
PEX3P56589 AC018552.3-201ENST00000567416 561 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.94□□□□□ -1.78
PEX3P56589 AC125494.3-201ENST00000602759 455 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AP002906.1-201ENST00000603405 233 ntBASIC3.94□□□□□ -1.78
PEX3P56589 U4.6-201ENST00000621618 127 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC126544.2-201ENST00000625174 749 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AL356118.1-201ENST00000635272 1078 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC006927.2-201ENST00000639256 389 ntBASIC3.94□□□□□ -1.78
PEX3P56589 AC007529.1-201ENST00000418574 2178 ntBASIC3.94□□□□□ -1.78
PEX3P56589 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.94□□□□□ -1.78
PEX3P56589 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
PEX3P56589 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
PEX3P56589 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
PEX3P56589 RNA5SP42-201ENST00000364278 115 ntBASIC3.93□□□□□ -1.78
PEX3P56589 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
PEX3P56589 RPS29P4-201ENST00000414733 161 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.93□□□□□ -1.78
PEX3P56589 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 AC241520.1-201ENST00000422654 1099 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 CYCSP4-201ENST00000429682 331 ntBASIC3.93□□□□□ -1.78
PEX3P56589 HMGN2P31-201ENST00000432430 273 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.93□□□□□ -1.78
PEX3P56589 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.93□□□□□ -1.78
PEX3P56589 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PEX3P56589 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.93□□□□□ -1.78
PEX3P56589 MTCO3P20-201ENST00000454926 688 ntBASIC3.93□□□□□ -1.78
PEX3P56589 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC111193.1-201ENST00000504097 155 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC008565.1-201ENST00000509046 885 ntBASIC3.93□□□□□ -1.78
PEX3P56589 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.93□□□□□ -1.78
PEX3P56589 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 RN7SKP157-201ENST00000516174 282 ntBASIC3.93□□□□□ -1.78
PEX3P56589 OR8I1P-201ENST00000529291 931 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.93□□□□□ -1.78
PEX3P56589 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
PEX3P56589 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.93□□□□□ -1.78
PEX3P56589 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PEX3P56589 MTND4LP24-201ENST00000572277 291 ntBASIC3.93□□□□□ -1.78
PEX3P56589 MIR4789-201ENST00000577469 82 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms