Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AP000919.1-202ENST00000581139 1264 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AC006130.2-201ENST00000586202 326 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 AC010680.4-201ENST00000605334 543 ntBASIC3.47□□□□□ -1.85
LIM2P55344 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 AL121772.2-201ENST00000614331 297 ntBASIC3.47□□□□□ -1.85
LIM2P55344 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.47□□□□□ -1.85
LIM2P55344 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 DCAF13P3-201ENST00000561147 1334 ntBASIC3.46□□□□□ -1.85
LIM2P55344 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIM2P55344 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIM2P55344 RNU5B-4P-201ENST00000363508 111 ntBASIC3.46□□□□□ -1.86
LIM2P55344 RNU6-283P-201ENST00000364788 107 ntBASIC3.46□□□□□ -1.86
LIM2P55344 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 MIR16-1-201ENST00000385271 89 ntBASIC3.46□□□□□ -1.86
LIM2P55344 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIM2P55344 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 RNU2-21P-201ENST00000410368 188 ntBASIC3.46□□□□□ -1.86
LIM2P55344 RHEBP3-201ENST00000411920 351 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 AL365396.1-201ENST00000430854 671 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AL035246.1-201ENST00000433554 1255 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC007389.2-201ENST00000434630 306 ntBASIC3.46□□□□□ -1.86
LIM2P55344 RPL7P28-201ENST00000437739 740 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.46□□□□□ -1.86
LIM2P55344 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.46□□□□□ -1.86
LIM2P55344 ACTR3P3-201ENST00000480448 893 ntBASIC3.46□□□□□ -1.86
LIM2P55344 HMGN1P11-201ENST00000508668 303 ntBASIC3.46□□□□□ -1.86
LIM2P55344 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
LIM2P55344 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
LIM2P55344 SOD1P3-201ENST00000518682 454 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AF279873.1-201ENST00000523393 313 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.46□□□□□ -1.86
LIM2P55344 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.46□□□□□ -1.86
LIM2P55344 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 BPTFP1-201ENST00000579209 492 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.46□□□□□ -1.86
LIM2P55344 AC008507.2-201ENST00000588402 1176 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.46□□□□□ -1.86
LIM2P55344 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 AC068620.3-201ENST00000602749 560 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC010680.3-201ENST00000604215 520 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC112230.1-201ENST00000604342 547 ntBASIC3.46□□□□□ -1.86
LIM2P55344 BNIP3P31-201ENST00000604515 566 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC009948.4-201ENST00000604692 675 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AL109618.2-201ENST00000605527 211 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC013468.1-201ENST00000608680 598 ntBASIC3.46□□□□□ -1.86
LIM2P55344 AC105429.2-201ENST00000610567 517 ntBASIC3.46□□□□□ -1.86
LIM2P55344 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.46□□□□□ -1.86
LIM2P55344 AL590396.4-201ENST00000636779 956 ntBASIC3.46□□□□□ -1.86
LIM2P55344 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIM2P55344 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.46□□□□□ -1.86
LIM2P55344 HSPA8P1-201ENST00000425843 1833 ntBASIC3.46□□□□□ -1.86
LIM2P55344 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.46□□□□□ -1.86
LIM2P55344 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIM2P55344 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 AC138393.1-206ENST00000540997 1886 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 SGO1P1-201ENST00000603525 1447 ntBASIC3.45□□□□□ -1.86
LIM2P55344 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 AC007685.1-201ENST00000329806 452 ntBASIC3.45□□□□□ -1.86
LIM2P55344 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIM2P55344 RNU5B-1-201ENST00000363286 116 ntBASIC3.45□□□□□ -1.86
LIM2P55344 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
LIM2P55344 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TMSB4XP8-201ENST00000402089 135 ntBASIC3.45□□□□□ -1.86
LIM2P55344 MTCO2P31-201ENST00000402702 684 ntBASIC3.45□□□□□ -1.86
LIM2P55344 RNU6ATAC-201ENST00000408749 126 ntBASIC3.45□□□□□ -1.86
LIM2P55344 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 RPL30P2-201ENST00000414021 291 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TMSB4XP6-201ENST00000415187 135 ntBASIC3.45□□□□□ -1.86
LIM2P55344 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.45□□□□□ -1.86
LIM2P55344 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.45□□□□□ -1.86
LIM2P55344 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
LIM2P55344 AC246680.2-201ENST00000422106 389 ntBASIC3.45□□□□□ -1.86
LIM2P55344 TMSB4XP1-201ENST00000424567 135 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms