Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL596327.1-201ENST00000603629 213 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC093765.1-201ENST00000603758 881 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC092354.1-201ENST00000606057 376 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AL031775.1-201ENST00000607014 887 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 AC103591.3-201ENST00000608684 209 ntBASIC4.15□□□□□ -1.75
CDH12P55289 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 MIR7844-201ENST00000616161 122 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC018816.2-201ENST00000621460 353 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC007546.2-201ENST00000623996 360 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC079228.1-201ENST00000624774 1049 ntBASIC4.15□□□□□ -1.75
CDH12P55289 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 AC131971.1-201ENST00000332881 1482 ntBASIC4.15□□□□□ -1.75
CDH12P55289 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 AL450326.2-201ENST00000421913 1962 ntBASIC4.14□□□□□ -1.75
CDH12P55289 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
CDH12P55289 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 AC117529.2-201ENST00000512159 2068 ntBASIC4.14□□□□□ -1.75
CDH12P55289 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 AC021146.4-201ENST00000309229 279 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RNA5SP52-201ENST00000362448 134 ntBASIC4.14□□□□□ -1.75
CDH12P55289 U3.4-201ENST00000363352 213 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RNU4-75P-201ENST00000364621 146 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RNU6-441P-201ENST00000384545 106 ntBASIC4.14□□□□□ -1.75
CDH12P55289 Y_RNA.553-201ENST00000384670 102 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC007066.1-201ENST00000392902 381 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 AL953862.1-201ENST00000423016 168 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC093698.1-201ENST00000423843 571 ntBASIC4.14□□□□□ -1.75
CDH12P55289 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 AC104837.2-201ENST00000427236 424 ntBASIC4.14□□□□□ -1.75
CDH12P55289 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 AC011753.3-201ENST00000443436 406 ntBASIC4.14□□□□□ -1.75
CDH12P55289 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 MTCO1P48-201ENST00000448024 1096 ntBASIC4.14□□□□□ -1.75
CDH12P55289 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 USP9YP10-201ENST00000454868 628 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC018638.3-201ENST00000461273 132 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RPL30P9-201ENST00000465586 330 ntBASIC4.14□□□□□ -1.75
CDH12P55289 RN7SL329P-201ENST00000467740 299 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AP000893.1-201ENST00000474462 794 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC008638.1-201ENST00000506035 866 ntBASIC4.14□□□□□ -1.75
CDH12P55289 MTATP6P22-201ENST00000507369 598 ntBASIC4.14□□□□□ -1.75
CDH12P55289 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
CDH12P55289 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 MTND3P5-201ENST00000512798 333 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC018797.3-201ENST00000513388 1241 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 AP001922.4-201ENST00000526967 290 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AP003033.1-201ENST00000527244 415 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 PCNPP1-201ENST00000552501 511 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 GTF2IP22-201ENST00000554443 182 ntBASIC4.14□□□□□ -1.75
CDH12P55289 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH12P55289 AC091042.1-201ENST00000579213 173 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH12P55289 Z98200.1-201ENST00000607298 470 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 AC009704.2-201ENST00000618739 483 ntBASIC4.14□□□□□ -1.75
CDH12P55289 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 MIR6719-201ENST00000622428 87 ntBASIC4.14□□□□□ -1.75
CDH12P55289 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 AC090582.1-201ENST00000636321 199 ntBASIC4.14□□□□□ -1.75
CDH12P55289 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH12P55289 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH12P55289 ZNF37BP-203ENST00000452306 1352 ntBASIC4.14□□□□□ -1.75
CDH12P55289 DDX43P2-201ENST00000604753 1354 ntBASIC4.14□□□□□ -1.75
CDH12P55289 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH12P55289 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH12P55289 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms