Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP1B3P54709 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 RNA5SP443-201ENST00000363083 132 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 SNORD6-201ENST00000365444 73 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 SNORA56-201ENST00000383966 129 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 MIR649-201ENST00000384843 97 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 MT-TC-201ENST00000387405 66 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AL807761.1-201ENST00000417622 171 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP1B3P54709 Z97055.1-201ENST00000419730 712 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 RPL21P109-201ENST00000422213 475 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 DEFB130D-201ENST00000426866 237 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 BMS1P19-201ENST00000433925 393 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 ELOCP13-201ENST00000443934 329 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 GXYLT1P1-201ENST00000446657 490 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AC119751.1-201ENST00000513357 765 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 C1GALT1P3-201ENST00000522049 819 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AP001207.1-201ENST00000524051 481 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 NIFKP8-201ENST00000560500 874 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AC093510.2-201ENST00000562820 896 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 KPNA2P3-201ENST00000584190 848 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AL669831.4-202ENST00000590817 238 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP1B3P54709 AC090425.2-201ENST00000608818 501 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 AC093875.1-201ENST00000623688 504 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 AC112484.5-201ENST00000624189 228 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 OR52H1-202ENST00000641796 1061 ntBASIC3.31□□□□□ -1.88
ATP1B3P54709 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP1B3P54709 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP1B3P54709 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ATP1B3P54709 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 OTUD4P1-201ENST00000237841 3067 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP1B3P54709 RNU6-339P-201ENST00000384310 107 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 MTCO2P31-201ENST00000402702 684 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AL121978.1-201ENST00000402778 359 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 USP9YP19-201ENST00000412165 485 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 TOMM22P1-201ENST00000418578 312 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 VN1R17P-201ENST00000472048 1090 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC091959.2-201ENST00000477363 321 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 TRBV12-2-201ENST00000489763 344 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 RPL23AP55-201ENST00000498163 452 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC108941.1-201ENST00000502853 530 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 OR5H5P-201ENST00000503164 928 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 RN7SKP244-201ENST00000516513 307 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 RNA5SP164-201ENST00000516533 110 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 RN7SKP209-201ENST00000516888 304 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 YPEL5P3-201ENST00000547227 352 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC091515.1-201ENST00000548110 679 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 MIR4789-201ENST00000577469 82 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP1B3P54709 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 AL513477.2-201ENST00000607858 568 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AL354760.1-201ENST00000608357 643 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC013468.1-201ENST00000608680 598 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms