Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SERPINE4P-201ENST00000554978 281 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 HSPE1P5-201ENST00000561489 272 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.99□□□□□ -1.77
PDX1P52945 AP003973.1-201ENST00000604639 691 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.99□□□□□ -1.77
PDX1P52945 AC007349.4-201ENST00000608114 532 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AL354760.1-201ENST00000608357 643 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AL031666.3-201ENST00000609320 1006 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC105227.2-201ENST00000615075 605 ntBASIC3.99□□□□□ -1.77
PDX1P52945 LINC00901.1-201ENST00000617252 152 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC009237.17-201ENST00000618111 748 ntBASIC3.99□□□□□ -1.77
PDX1P52945 MIR6500-201ENST00000622700 86 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC097520.1-201ENST00000624435 385 ntBASIC3.99□□□□□ -1.77
PDX1P52945 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AC090971.4-201ENST00000560291 1800 ntBASIC3.99□□□□□ -1.77
PDX1P52945 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 OR52B1P-201ENST00000316506 909 ntBASIC3.98□□□□□ -1.77
PDX1P52945 MIR208A-201ENST00000362287 71 ntBASIC3.98□□□□□ -1.77
PDX1P52945 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.98□□□□□ -1.77
PDX1P52945 Y_RNA.408-201ENST00000383987 102 ntBASIC3.98□□□□□ -1.77
PDX1P52945 RNU6ATAC-201ENST00000408749 126 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.98□□□□□ -1.77
PDX1P52945 AL136133.1-201ENST00000413694 376 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC073136.2-201ENST00000417282 849 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.98□□□□□ -1.77
PDX1P52945 AC007435.1-201ENST00000421086 415 ntBASIC3.98□□□□□ -1.77
PDX1P52945 EIF4EP1-201ENST00000422311 642 ntBASIC3.98□□□□□ -1.77
PDX1P52945 RPS12P5-201ENST00000423449 371 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AL138785.1-201ENST00000425821 331 ntBASIC3.98□□□□□ -1.77
PDX1P52945 DPRXP1-201ENST00000426312 460 ntBASIC3.98□□□□□ -1.77
PDX1P52945 RPP40P1-201ENST00000426762 456 ntBASIC3.98□□□□□ -1.77
PDX1P52945 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 RPL23AP46-201ENST00000438548 490 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.98□□□□□ -1.77
PDX1P52945 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 Z99714.1-201ENST00000450463 807 ntBASIC3.98□□□□□ -1.77
PDX1P52945 MTATP6P22-201ENST00000507369 598 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC008837.2-201ENST00000513076 418 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.98□□□□□ -1.77
PDX1P52945 AP001207.1-201ENST00000524051 481 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 MTCO2P15-201ENST00000532655 656 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.98□□□□□ -1.77
PDX1P52945 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PDX1P52945 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 CYP4A43P-201ENST00000568156 121 ntBASIC3.98□□□□□ -1.77
PDX1P52945 MIR5685-201ENST00000579080 79 ntBASIC3.98□□□□□ -1.77
PDX1P52945 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.98□□□□□ -1.77
PDX1P52945 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.98□□□□□ -1.77
PDX1P52945 AL606490.9-201ENST00000603331 271 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC069545.1-201ENST00000605671 358 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC109809.1-201ENST00000619665 545 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AP002791.1-201ENST00000623291 381 ntBASIC3.98□□□□□ -1.77
PDX1P52945 AC067931.1-201ENST00000624190 671 ntBASIC3.98□□□□□ -1.77
PDX1P52945 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.98□□□□□ -1.77
PDX1P52945 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDX1P52945 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDX1P52945 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.98□□□□□ -1.77
PDX1P52945 AC116667.1-201ENST00000604855 2072 ntBASIC3.98□□□□□ -1.77
PDX1P52945 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AL590084.1-201ENST00000407885 387 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AL450992.3-201ENST00000413192 568 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.97□□□□□ -1.77
PDX1P52945 FCF1P2-201ENST00000415284 583 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 RBMY1KP-201ENST00000423480 476 ntBASIC3.97□□□□□ -1.77
PDX1P52945 GTF2IP23-201ENST00000423746 351 ntBASIC3.97□□□□□ -1.77
PDX1P52945 RPL36P19-201ENST00000430744 301 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC023347.2-201ENST00000433994 462 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms