Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
HTTP42858 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HTTP42858 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
HTTP42858 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.15□□□□□ -1.9
HTTP42858 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.15□□□□□ -1.91
HTTP42858 AL049555.1-201ENST00000562834 1933 ntBASIC3.15□□□□□ -1.91
HTTP42858 Y_RNA.118-201ENST00000363300 101 ntBASIC3.15□□□□□ -1.91
HTTP42858 RNA5SP39-201ENST00000411245 120 ntBASIC3.15□□□□□ -1.91
HTTP42858 MTCO1P52-201ENST00000433928 531 ntBASIC3.15□□□□□ -1.91
HTTP42858 DNAJC19P1-201ENST00000455312 319 ntBASIC3.15□□□□□ -1.91
HTTP42858 AC005351.1-201ENST00000511152 786 ntBASIC3.15□□□□□ -1.91
HTTP42858 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.15□□□□□ -1.91
HTTP42858 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
HTTP42858 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HTTP42858 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.15□□□□□ -1.91
HTTP42858 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HTTP42858 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.15□□□□□ -1.91
HTTP42858 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.15□□□□□ -1.91
HTTP42858 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
HTTP42858 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HTTP42858 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HTTP42858 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HTTP42858 TAB3P1-202ENST00000452645 1634 ntBASIC3.14□□□□□ -1.91
HTTP42858 MTND2P11-201ENST00000423638 648 ntBASIC3.14□□□□□ -1.91
HTTP42858 MTCO1P51-201ENST00000427672 1060 ntBASIC3.14□□□□□ -1.91
HTTP42858 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.14□□□□□ -1.91
HTTP42858 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
HTTP42858 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.14□□□□□ -1.91
HTTP42858 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.14□□□□□ -1.91
HTTP42858 YWHAZP1-201ENST00000556286 722 ntBASIC3.14□□□□□ -1.91
HTTP42858 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
HTTP42858 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HTTP42858 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HTTP42858 AC005005.4-201ENST00000623789 16698 ntBASIC3.14□□□□□ -1.91
HTTP42858 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.14□□□□□ -1.91
HTTP42858 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.14□□□□□ -1.91
HTTP42858 YWHAEP5-201ENST00000431545 765 ntBASIC3.14□□□□□ -1.91
HTTP42858 PISRT1-201ENST00000626175 531 ntBASIC3.14□□□□□ -1.91
HTTP42858 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HTTP42858 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.14□□□□□ -1.91
HTTP42858 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
HTTP42858 MIR592-201ENST00000384959 97 ntBASIC3.13□□□□□ -1.91
HTTP42858 MIR7-2-201ENST00000384970 110 ntBASIC3.13□□□□□ -1.91
HTTP42858 MIR1287-201ENST00000408492 90 ntBASIC3.13□□□□□ -1.91
HTTP42858 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.13□□□□□ -1.91
HTTP42858 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.13□□□□□ -1.91
HTTP42858 RPL12P26-201ENST00000452430 487 ntBASIC3.13□□□□□ -1.91
HTTP42858 HMGN2P23-201ENST00000456759 269 ntBASIC3.13□□□□□ -1.91
HTTP42858 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.13□□□□□ -1.91
HTTP42858 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.13□□□□□ -1.91
HTTP42858 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.13□□□□□ -1.91
HTTP42858 AC110754.1-201ENST00000399740 601 ntBASIC3.13□□□□□ -1.91
HTTP42858 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.13□□□□□ -1.91
HTTP42858 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.13□□□□□ -1.91
HTTP42858 UQCRHP3-201ENST00000451503 251 ntBASIC3.13□□□□□ -1.91
HTTP42858 AC243972.3-201ENST00000539655 198 ntBASIC3.13□□□□□ -1.91
HTTP42858 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HTTP42858 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HTTP42858 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.13□□□□□ -1.91
HTTP42858 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HTTP42858 AC008725.1-201ENST00000605123 2263 ntBASIC3.13□□□□□ -1.91
HTTP42858 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HTTP42858 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.13□□□□□ -1.91
HTTP42858 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.13□□□□□ -1.91
HTTP42858 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.13□□□□□ -1.91
HTTP42858 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.13□□□□□ -1.91
HTTP42858 AC092079.1-201ENST00000558620 1985 ntBASIC3.12□□□□□ -1.91
HTTP42858 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HTTP42858 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HTTP42858 RNA5SP104-201ENST00000410989 118 ntBASIC3.12□□□□□ -1.91
HTTP42858 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.12□□□□□ -1.91
HTTP42858 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.12□□□□□ -1.91
HTTP42858 MIR4738-201ENST00000579134 87 ntBASIC3.12□□□□□ -1.91
HTTP42858 MIR518C-201ENST00000384822 101 ntBASIC3.12□□□□□ -1.91
HTTP42858 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.12□□□□□ -1.91
HTTP42858 B3GNT2P1-201ENST00000434960 952 ntBASIC3.12□□□□□ -1.91
HTTP42858 OR5H5P-201ENST00000503164 928 ntBASIC3.12□□□□□ -1.91
HTTP42858 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.12□□□□□ -1.91
HTTP42858 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.12□□□□□ -1.91
HTTP42858 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC3.12□□□□□ -1.91
HTTP42858 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HTTP42858 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.12□□□□□ -1.91
HTTP42858 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 RNA5SP99-201ENST00000364020 114 ntBASIC3.11□□□□□ -1.91
HTTP42858 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.11□□□□□ -1.91
HTTP42858 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
HTTP42858 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
HTTP42858 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.11□□□□□ -1.91
HTTP42858 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
HTTP42858 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.11□□□□□ -1.91
HTTP42858 OR11H5P-201ENST00000554039 926 ntBASIC3.11□□□□□ -1.91
HTTP42858 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.11□□□□□ -1.91
HTTP42858 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms