Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC110768.1-201ENST00000509222 400 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 RNU6-416P-201ENST00000516265 103 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 RNU1-95P-201ENST00000516357 160 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 RNU1-128P-201ENST00000516704 160 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 RNA5SP179-201ENST00000517284 121 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.08□□□□□ -1.6
COL15A1P39059 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.08□□□□□ -1.6
COL15A1P39059 MTCO1P47-201ENST00000523889 1271 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.08□□□□□ -1.6
COL15A1P39059 OR5M7P-201ENST00000526140 972 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC125611.1-201ENST00000549563 229 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 NBEAP1-201ENST00000554452 979 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC022968.1-201ENST00000567372 442 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.08□□□□□ -1.6
COL15A1P39059 RPL23AP87-202ENST00000573039 466 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.08□□□□□ -1.6
COL15A1P39059 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.08□□□□□ -1.6
COL15A1P39059 AL451044.1-201ENST00000604867 238 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC007179.3-201ENST00000604976 235 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC091167.4-201ENST00000605079 184 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.08□□□□□ -1.6
COL15A1P39059 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.08□□□□□ -1.6
COL15A1P39059 AP005137.2-201ENST00000609238 400 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 AL391261.4-201ENST00000616012 481 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL15A1P39059 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL15A1P39059 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.08□□□□□ -1.6
COL15A1P39059 Z82217.1-201ENST00000625157 8149 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL15A1P39059 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.08□□□□□ -1.6
COL15A1P39059 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
COL15A1P39059 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
COL15A1P39059 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL15A1P39059 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL15A1P39059 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.08□□□□□ -1.6
COL15A1P39059 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
COL15A1P39059 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
COL15A1P39059 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 RNA5SP399-201ENST00000364003 117 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 RNU6-178P-201ENST00000384631 104 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.07□□□□□ -1.6
COL15A1P39059 TRGV6-201ENST00000417928 299 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC006960.1-201ENST00000419980 153 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC048351.1-201ENST00000420064 602 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 GTF2IP23-201ENST00000423746 351 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC091390.3-201ENST00000426478 338 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 OR4F13P-201ENST00000428478 931 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 CBX1P4-201ENST00000439415 457 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 RPS7P5-201ENST00000441482 581 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AL133217.1-201ENST00000450980 425 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 AC011979.1-201ENST00000472300 483 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.07□□□□□ -1.6
COL15A1P39059 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.07□□□□□ -1.6
COL15A1P39059 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 AC090751.1-201ENST00000566966 267 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.07□□□□□ -1.6
COL15A1P39059 Z99497.2-201ENST00000603634 310 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AC005344.1-201ENST00000613391 459 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 AL034408.1-202ENST00000636088 415 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 ATE1-AS1-202ENST00000636460 506 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 MIR3974-201ENST00000637126 96 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 AC046144.1-201ENST00000478559 1853 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
COL15A1P39059 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
COL15A1P39059 AP005901.5-201ENST00000545779 1796 ntBASIC5.07□□□□□ -1.6
COL15A1P39059 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL15A1P39059 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL15A1P39059 OR5H2-201ENST00000355273 945 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL15A1P39059 SNORD35B-201ENST00000363660 87 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 RNU6-707P-201ENST00000364647 95 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 SNORA9-201ENST00000384215 133 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 AC093719.1-202ENST00000392735 373 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 RPL21P17-201ENST00000397467 475 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.06□□□□□ -1.6
COL15A1P39059 RAP1BP1-201ENST00000412709 553 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 GSTM3P2-201ENST00000412746 530 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL15A1P39059 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL15A1P39059 AC009518.2-201ENST00000418056 731 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 Z97055.1-201ENST00000419730 712 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL15A1P39059 AC083863.1-201ENST00000438811 231 ntBASIC5.06□□□□□ -1.6
COL15A1P39059 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.06□□□□□ -1.6
COL15A1P39059 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL15A1P39059 HMGB1P16-201ENST00000447155 540 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms