Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL391497.1-201ENST00000608671 547 ntBASIC3.6□□□□□ -1.83
FDFT1P37268 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
FDFT1P37268 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
FDFT1P37268 MIR7153-201ENST00000637758 57 ntBASIC3.6□□□□□ -1.83
FDFT1P37268 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
FDFT1P37268 GABPAP-201ENST00000419271 1356 ntBASIC3.6□□□□□ -1.83
FDFT1P37268 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FDFT1P37268 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FDFT1P37268 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.6□□□□□ -1.83
FDFT1P37268 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FDFT1P37268 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FDFT1P37268 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
FDFT1P37268 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
FDFT1P37268 RNU6-252P-201ENST00000363232 107 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 AL355379.1-201ENST00000405542 640 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 HMGB3P18-201ENST00000406327 590 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 UBE2V1P15-201ENST00000407776 448 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 RN7SKP263-201ENST00000411194 309 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 RAB28P1-201ENST00000411517 641 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 EI24P1-201ENST00000416584 867 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.59□□□□□ -1.83
FDFT1P37268 RPS15AP6-201ENST00000420703 385 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 OR51AB1P-201ENST00000429046 620 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC068135.1-201ENST00000446164 246 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.59□□□□□ -1.83
FDFT1P37268 RPL6P9-201ENST00000466502 859 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC110768.1-201ENST00000509222 400 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.59□□□□□ -1.83
FDFT1P37268 IGKV2-23-201ENST00000518729 323 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.59□□□□□ -1.83
FDFT1P37268 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 SERPINE4P-201ENST00000554978 281 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC090616.5-202ENST00000582111 297 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC018754.1-201ENST00000607486 925 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 STMN1P1-201ENST00000617809 440 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.59□□□□□ -1.83
FDFT1P37268 AC068724.3-201ENST00000625906 87 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 HPVC1-201ENST00000629899 1198 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 FRG1DP-201ENST00000635586 771 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
FDFT1P37268 MTND4P21-201ENST00000453886 1357 ntBASIC3.59□□□□□ -1.83
FDFT1P37268 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
FDFT1P37268 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.59□□□□□ -1.84
FDFT1P37268 AL592494.2-201ENST00000425455 1548 ntBASIC3.59□□□□□ -1.84
FDFT1P37268 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.84
FDFT1P37268 AC046144.1-201ENST00000478559 1853 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FDFT1P37268 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
FDFT1P37268 SNORD9-201ENST00000362566 104 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AP002088.1-201ENST00000382740 395 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 SNORA51.12-201ENST00000384448 134 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 HSPE1P26-201ENST00000405341 275 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.58□□□□□ -1.84
FDFT1P37268 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FDFT1P37268 RPL17P36-201ENST00000420302 549 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.58□□□□□ -1.84
FDFT1P37268 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.58□□□□□ -1.84
FDFT1P37268 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.58□□□□□ -1.84
FDFT1P37268 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.58□□□□□ -1.84
FDFT1P37268 NPM1P49-201ENST00000448027 714 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 RPL12P26-201ENST00000452430 487 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 SNORD105B-201ENST00000458770 79 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 CYCSP20-201ENST00000473154 315 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC007688.1-201ENST00000475592 759 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 RPL7P47-201ENST00000497299 556 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 TRAV31-201ENST00000502780 342 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.58□□□□□ -1.84
FDFT1P37268 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.58□□□□□ -1.84
FDFT1P37268 RN7SKP21-201ENST00000516503 220 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 HMGB1P23-201ENST00000518743 568 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.58□□□□□ -1.84
FDFT1P37268 C1DP5-201ENST00000525775 383 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.58□□□□□ -1.84
FDFT1P37268 OR5D17P-201ENST00000531492 978 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.58□□□□□ -1.84
FDFT1P37268 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.58□□□□□ -1.84
FDFT1P37268 ZNF192P1-203ENST00000565888 810 ntBASIC3.58□□□□□ -1.84
FDFT1P37268 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.58□□□□□ -1.84
FDFT1P37268 MIR3160-1-201ENST00000577972 85 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms