Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC106806.2-201ENST00000509365 500 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.16□□□□□ -1.74
CTNNA1P35221 SNORA31.20-201ENST00000517111 133 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.16□□□□□ -1.74
CTNNA1P35221 AC012182.1-201ENST00000570133 895 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 MIR4644-201ENST00000579929 84 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 MIR4666A-201ENST00000580160 79 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.16□□□□□ -1.74
CTNNA1P35221 AC068790.4-201ENST00000602474 263 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.16□□□□□ -1.74
CTNNA1P35221 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 VN1R7P-201ENST00000619242 903 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 MIR6730-201ENST00000622213 67 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 AL512506.2-201ENST00000624472 458 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 CR381572.1-201ENST00000625098 102 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 AC006927.2-201ENST00000639256 389 ntBASIC4.16□□□□□ -1.74
CTNNA1P35221 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.16□□□□□ -1.74
CTNNA1P35221 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.16□□□□□ -1.74
CTNNA1P35221 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.16□□□□□ -1.74
CTNNA1P35221 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTNNA1P35221 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CTNNA1P35221 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.15□□□□□ -1.74
CTNNA1P35221 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTNNA1P35221 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTNNA1P35221 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTNNA1P35221 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTNNA1P35221 AL353746.1-201ENST00000566293 6881 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA1P35221 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AC234772.1-201ENST00000377927 937 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 RNU6-730P-201ENST00000383954 104 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 RNU6-821P-201ENST00000390995 107 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AL138878.1-201ENST00000405131 347 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AL133384.1-201ENST00000412744 351 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC005345.1-201ENST00000431868 217 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 KCTD10P1-201ENST00000434203 625 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA1P35221 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.15□□□□□ -1.75
CTNNA1P35221 RPS17P13-201ENST00000448974 407 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AC078785.3-201ENST00000476607 425 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 MTCO3P35-201ENST00000485582 781 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC026414.1-201ENST00000504046 698 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC004069.2-201ENST00000505438 1114 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA1P35221 MED28P5-201ENST00000528254 438 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC092451.2-201ENST00000538746 658 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.15□□□□□ -1.75
CTNNA1P35221 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.15□□□□□ -1.75
CTNNA1P35221 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC009318.4-201ENST00000620496 486 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 AC010608.2-201ENST00000624830 470 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.15□□□□□ -1.75
CTNNA1P35221 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CTNNA1P35221 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTNNA1P35221 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AP001148.1-201ENST00000624124 2359 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA1P35221 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTNNA1P35221 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA1P35221 MIR423-201ENST00000362201 94 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 RNA5SP258-201ENST00000362750 119 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 RNU5B-4P-201ENST00000363508 111 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTNNA1P35221 MTND4LP20-201ENST00000402379 270 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNNA1P35221 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 OR5BE1P-201ENST00000425977 939 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 MTCYBP32-201ENST00000427945 1084 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 HIGD1AP4-201ENST00000430194 280 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 AL365396.1-201ENST00000430854 671 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNNA1P35221 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNNA1P35221 RPS11P1-201ENST00000451072 473 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 HMGN2P16-201ENST00000456802 261 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CTNNA1P35221 AL132838.2-201ENST00000492041 314 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 MTCYBP37-201ENST00000510642 1133 ntBASIC4.14□□□□□ -1.75
CTNNA1P35221 AC093840.1-201ENST00000511599 336 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms