Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU6-352P-201ENST00000516908 107 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.74□□□□□ -1.81
CASQ1P31415 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.74□□□□□ -1.81
CASQ1P31415 MED28P5-201ENST00000528254 438 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.74□□□□□ -1.81
CASQ1P31415 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.74□□□□□ -1.81
CASQ1P31415 MIR4277-201ENST00000578298 84 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 MIR4506-201ENST00000584693 77 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 VIS1.1-201ENST00000610517 203 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 MIR6867-201ENST00000610636 67 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 AC016717.3-201ENST00000624730 554 ntBASIC3.74□□□□□ -1.81
CASQ1P31415 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CASQ1P31415 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CASQ1P31415 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CASQ1P31415 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.73□□□□□ -1.81
CASQ1P31415 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.73□□□□□ -1.81
CASQ1P31415 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.73□□□□□ -1.81
CASQ1P31415 AC023598.1-201ENST00000472521 361 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 AC126121.1-201ENST00000482313 553 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.73□□□□□ -1.81
CASQ1P31415 FABP5P6-201ENST00000510588 409 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.73□□□□□ -1.81
CASQ1P31415 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.73□□□□□ -1.81
CASQ1P31415 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.73□□□□□ -1.81
CASQ1P31415 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.73□□□□□ -1.81
CASQ1P31415 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.73□□□□□ -1.81
CASQ1P31415 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CASQ1P31415 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CASQ1P31415 AL365440.1-201ENST00000436135 2167 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CASQ1P31415 AC008264.2-201ENST00000610193 3731 ntBASIC3.73□□□□□ -1.81
CASQ1P31415 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CASQ1P31415 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.72□□□□□ -1.81
CASQ1P31415 RNU6-213P-201ENST00000384051 104 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 MIR192-201ENST00000384915 110 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CASQ1P31415 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 RN7SKP53-201ENST00000411337 315 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 RFESDP1-201ENST00000422350 461 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.72□□□□□ -1.81
CASQ1P31415 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.72□□□□□ -1.81
CASQ1P31415 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 RPL32P9-201ENST00000487963 407 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 RN7SL323P-201ENST00000494712 295 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.72□□□□□ -1.81
CASQ1P31415 RN7SKP283-201ENST00000517197 270 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC019227.1-201ENST00000526902 510 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC034268.2-201ENST00000571784 482 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 SNORD84-203ENST00000584275 78 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 BDH2P1-201ENST00000602288 736 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 NTAN1P1-201ENST00000603150 646 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC073387.2-201ENST00000604797 784 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 AC020923.1-201ENST00000624021 917 ntBASIC3.72□□□□□ -1.81
CASQ1P31415 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.72□□□□□ -1.81
CASQ1P31415 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.72□□□□□ -1.81
CASQ1P31415 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.72□□□□□ -1.81
CASQ1P31415 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CASQ1P31415 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.72□□□□□ -1.81
CASQ1P31415 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.72□□□□□ -1.81
CASQ1P31415 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CASQ1P31415 MTND5P7-201ENST00000413558 1798 ntBASIC3.71□□□□□ -1.81
CASQ1P31415 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CASQ1P31415 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASQ1P31415 RNU6-98P-201ENST00000384173 107 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CASQ1P31415 OR6C69P-201ENST00000394268 893 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 PRRC2CP1-201ENST00000404428 159 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 RNU6-1077P-201ENST00000410506 102 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.71□□□□□ -1.82
CASQ1P31415 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.71□□□□□ -1.82
CASQ1P31415 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.71□□□□□ -1.82
CASQ1P31415 AC010285.1-201ENST00000470580 392 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 RPS26P21-201ENST00000475397 348 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.71□□□□□ -1.82
CASQ1P31415 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.71□□□□□ -1.82
CASQ1P31415 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CASQ1P31415 RNU6-491P-201ENST00000516099 110 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 RN7SKP21-201ENST00000516503 220 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.71□□□□□ -1.82
CASQ1P31415 AC245166.1-201ENST00000521012 253 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.71□□□□□ -1.82
CASQ1P31415 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.71□□□□□ -1.82
CASQ1P31415 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.71□□□□□ -1.82
CASQ1P31415 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms