Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP1P30622 RNA5SP383-201ENST00000362934 120 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 RPL23AP48-201ENST00000406913 488 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP1P30622 SUMO2P4-201ENST00000504193 276 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 HIGD1AP13-201ENST00000509878 289 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 RNA5SP367-201ENST00000516557 118 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 MIR4319-201ENST00000577285 85 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 AC245100.7-201ENST00000609678 442 ntBASIC4.7□□□□□ -1.66
CLIP1P30622 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP1P30622 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP1P30622 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP1P30622 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP1P30622 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP1P30622 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP1P30622 RPS17P11-201ENST00000474297 293 ntBASIC4.69□□□□□ -1.66
CLIP1P30622 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP1P30622 OR2AS2P-201ENST00000606902 342 ntBASIC4.69□□□□□ -1.66
CLIP1P30622 AL713922.2-201ENST00000619384 716 ntBASIC4.69□□□□□ -1.66
CLIP1P30622 AC004972.1-201ENST00000623934 2209 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP1P30622 U3.42-201ENST00000408746 214 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 AL645937.1-202ENST00000421799 937 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 NUP35P1-201ENST00000422734 947 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP1P30622 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP1P30622 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP1P30622 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.68□□□□□ -1.66
CLIP1P30622 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CLIP1P30622 CYCSP39-201ENST00000565821 309 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 ELOCP29-201ENST00000588193 334 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 AC024153.1-201ENST00000603103 365 ntBASIC4.68□□□□□ -1.66
CLIP1P30622 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP1P30622 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP1P30622 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP1P30622 ZNF90P1-201ENST00000480493 1951 ntBASIC4.67□□□□□ -1.66
CLIP1P30622 RNU6-301P-201ENST00000384277 107 ntBASIC4.67□□□□□ -1.66
CLIP1P30622 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP1P30622 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP1P30622 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.67□□□□□ -1.66
CLIP1P30622 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP1P30622 AC103881.1-201ENST00000603476 538 ntBASIC4.67□□□□□ -1.66
CLIP1P30622 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP1P30622 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP1P30622 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP1P30622 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLIP1P30622 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CLIP1P30622 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP1P30622 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.67□□□□□ -1.66
CLIP1P30622 AC245054.2-201ENST00000415639 319 ntBASIC4.66□□□□□ -1.66
CLIP1P30622 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP1P30622 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP1P30622 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP1P30622 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP1P30622 AC116312.1-201ENST00000606841 314 ntBASIC4.66□□□□□ -1.66
CLIP1P30622 AC022509.4-201ENST00000621404 572 ntBASIC4.66□□□□□ -1.66
CLIP1P30622 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CLIP1P30622 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP1P30622 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP1P30622 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP1P30622 MTCO1P24-201ENST00000515438 1558 ntBASIC4.66□□□□□ -1.66
CLIP1P30622 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP1P30622 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP1P30622 MIR449A-201ENST00000362113 91 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 RNU6-805P-201ENST00000365643 106 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLIP1P30622 SNORA48.8-201ENST00000391324 134 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 MTND4LP20-201ENST00000402379 270 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 RNA5SP184-201ENST00000411071 108 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP1P30622 NIPA2P5-201ENST00000452282 464 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 HMGN2P7-201ENST00000456186 273 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 RN7SKP132-201ENST00000516001 208 ntBASIC4.65□□□□□ -1.66
CLIP1P30622 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP1P30622 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.65□□□□□ -1.66
CLIP1P30622 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.65□□□□□ -1.66
CLIP1P30622 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CLIP1P30622 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLIP1P30622 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP1P30622 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP1P30622 FTLP6-201ENST00000355274 422 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 RNA5SP502-201ENST00000362694 119 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 AC022018.1-201ENST00000430685 241 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 UQCRHP3-201ENST00000451503 251 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP1P30622 IGKV2D-23-201ENST00000518179 286 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 AC079600.2-201ENST00000550076 130 ntBASIC4.64□□□□□ -1.67
CLIP1P30622 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP1P30622 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP1P30622 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP1P30622 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP1P30622 RNU6-851P-201ENST00000384565 107 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 NPM1P24-201ENST00000428039 894 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 RPL7P59-201ENST00000447700 943 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.63□□□□□ -1.67
CLIP1P30622 RN7SL633P-201ENST00000488974 297 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP1P30622 AC010653.1-201ENST00000571108 881 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP1P30622 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms