Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC025678.1-201ENST00000567861 338 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.2□□□□□ -1.58
COL6A2P12110 AC012146.2-201ENST00000576545 416 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC011840.5-201ENST00000582125 771 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.2□□□□□ -1.58
COL6A2P12110 BNIP3P9-201ENST00000603714 553 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC008814.1-201ENST00000603797 406 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC011816.2-201ENST00000607089 556 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.2□□□□□ -1.58
COL6A2P12110 HSPA8P18-201ENST00000439846 1928 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.2□□□□□ -1.58
COL6A2P12110 AL118496.1-201ENST00000440201 1812 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL6A2P12110 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL6A2P12110 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 MTND4P12-201ENST00000498999 1377 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 AC004817.4-201ENST00000602396 3625 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL6A2P12110 RNU6-1085P-201ENST00000363576 107 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 RN7SKP292-201ENST00000365522 317 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL6A2P12110 RNU6-876P-201ENST00000391295 104 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AL031985.1-201ENST00000392713 418 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AL031679.1-201ENST00000400616 525 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 RNU2-50P-201ENST00000410494 143 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 RNU2-8P-201ENST00000410727 190 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 RNU6-195P-201ENST00000411352 109 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.19□□□□□ -1.58
COL6A2P12110 OR51A5P-201ENST00000415429 942 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 HMGB3P20-201ENST00000417997 600 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 USP9YP27-201ENST00000418455 438 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 MTND6P12-201ENST00000428247 522 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 MTCO2P11-201ENST00000431069 680 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 CBX1P1-201ENST00000440184 427 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC002381.1-201ENST00000447049 280 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.19□□□□□ -1.58
COL6A2P12110 BX322784.1-201ENST00000455793 1077 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AC007182.2-201ENST00000489251 402 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC105914.1-201ENST00000511798 226 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 RNU6-507P-201ENST00000516045 100 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 SCARNA21.2-201ENST00000516600 166 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.19□□□□□ -1.58
COL6A2P12110 MIR4505-201ENST00000582238 73 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.19□□□□□ -1.58
COL6A2P12110 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 AC009994.1-201ENST00000606889 253 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC000068.2-201ENST00000608816 460 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 AL020991.1-201ENST00000612314 373 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC091905.1-201ENST00000624400 311 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.19□□□□□ -1.58
COL6A2P12110 AC073869.10-201ENST00000642016 354 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 AC000374.1-201ENST00000434698 1745 ntBASIC5.19□□□□□ -1.58
COL6A2P12110 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL6A2P12110 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.19□□□□□ -1.58
COL6A2P12110 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL6A2P12110 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 AL049780.3-201ENST00000624612 1583 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AL354685.2-201ENST00000448218 1447 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 MIR133B-201ENST00000362210 119 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 Y_RNA.46-201ENST00000362695 102 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms