Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 POLR2KP1-201ENST00000553226 168 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC073544.2-201ENST00000601155 540 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 WISP1-OT1-201ENST00000602893 642 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC103881.1-201ENST00000603476 538 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC069209.1-201ENST00000619282 651 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC140113.4-201ENST00000622087 222 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 AL122126.1-201ENST00000546905 1318 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
SNRPA1P09661 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SNRPA1P09661 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
SNRPA1P09661 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 MIR1179-201ENST00000408703 91 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 RBMY1KP-201ENST00000423480 476 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 DPRXP1-201ENST00000426312 460 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AL591623.2-201ENST00000449978 222 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 VN1R105P-201ENST00000486595 910 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 RPL21P129-201ENST00000491732 478 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.36□□□□□ -1.55
SNRPA1P09661 IFITM8P-201ENST00000522529 394 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.36□□□□□ -1.55
SNRPA1P09661 RN7SL703P-201ENST00000578485 302 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 VN1R88P-201ENST00000596787 292 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC009220.3-201ENST00000604318 586 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AC018714.1-201ENST00000605028 208 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC023813.4-201ENST00000607580 580 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SNRPA1P09661 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC109315.1-201ENST00000584143 1347 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNRPA1P09661 USP9YP4-201ENST00000424401 1745 ntBASIC5.36□□□□□ -1.55
SNRPA1P09661 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SNRPA1P09661 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
SNRPA1P09661 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SNRPA1P09661 RNA5SP296-201ENST00000410523 111 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AL161631.1-201ENST00000417933 486 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.35□□□□□ -1.55
SNRPA1P09661 OR5BE1P-201ENST00000425977 939 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 SEPT7P5-201ENST00000434048 306 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC093155.1-201ENST00000440164 826 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 AL035551.1-201ENST00000446931 348 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 MTCO2P25-201ENST00000447065 681 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 RFC5P1-201ENST00000454419 874 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 SNORA84-201ENST00000459229 133 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 RNU7-27P-201ENST00000459281 62 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 SETP11-201ENST00000473027 690 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC107401.1-201ENST00000503426 685 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC010460.1-201ENST00000507087 466 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC091965.2-201ENST00000512324 613 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC087808.1-201ENST00000520501 361 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 HIGD1AP10-201ENST00000527837 282 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms