Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC092593.2-201ENST00000513866 913 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 SNORA31.8-201ENST00000516327 108 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC105129.1-201ENST00000560250 297 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 UBE2FP2-201ENST00000566646 462 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 MIR5186-201ENST00000577504 120 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AC091042.1-201ENST00000579213 173 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGB1P09429 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC013470.4-201ENST00000619978 986 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AL353748.2-201ENST00000622148 471 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 U6.98-201ENST00000637157 84 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB1P09429 MTND4P34-201ENST00000572715 1371 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB1P09429 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB1P09429 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB1P09429 IL6STP1-201ENST00000346911 1020 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 OR5H2-201ENST00000355273 945 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB1P09429 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGB1P09429 RNU1-94P-201ENST00000362627 173 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGB1P09429 MIR1284-201ENST00000408337 120 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 RN7SKP199-201ENST00000410325 305 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB1P09429 MTCO2P5-201ENST00000422621 426 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 Z74021.1-201ENST00000423610 407 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 SDCBPP1-201ENST00000440192 890 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB1P09429 VN1R25P-201ENST00000443385 738 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB1P09429 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGB1P09429 RPS3AP53-201ENST00000454716 778 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 RPS23P3-201ENST00000470993 430 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC093267.1-201ENST00000489176 961 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGB1P09429 AC011005.3-201ENST00000491624 395 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 NIPA2P2-201ENST00000496376 1083 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC146944.2-203ENST00000502493 354 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC139495.1-202ENST00000513164 354 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 RNU1-61P-201ENST00000516107 151 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 RNU6-150P-201ENST00000516237 95 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HMGB1P09429 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB1P09429 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB1P09429 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGB1P09429 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB1P09429 AC209154.1-201ENST00000582156 337 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB1P09429 DUXAP11-201ENST00000603858 526 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AL451086.1-201ENST00000605596 223 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC106028.5-201ENST00000610332 395 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB1P09429 MIR6853-201ENST00000619642 74 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 AC090772.4-201ENST00000623599 362 ntBASIC5.5□□□□□ -1.53
HMGB1P09429 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMGB1P09429 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB1P09429 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HMGB1P09429 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB1P09429 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGB1P09429 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB1P09429 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB1P09429 AL022578.1-201ENST00000439330 1433 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGB1P09429 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB1P09429 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 RNU6-1155P-201ENST00000363554 107 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 HMGB1P17-201ENST00000403495 628 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 MTCO1P39-201ENST00000426148 480 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 RNU7-136P-201ENST00000458819 69 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC092324.1-201ENST00000468671 324 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB1P09429 RPL23AP65-201ENST00000475608 468 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC017015.1-201ENST00000477387 286 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC110792.1-201ENST00000491826 472 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGB1P09429 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGB1P09429 USP9YP5-201ENST00000511770 630 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC006499.2-201ENST00000513470 337 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 OR5AK1P-201ENST00000524837 922 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGB1P09429 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 OR4K8P-201ENST00000578842 1048 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGB1P09429 AP001160.4-201ENST00000596971 382 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 RPL26P30-202ENST00000602923 645 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms