Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC022146.1-201ENST00000595307 847 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL031985.2-201ENST00000600955 480 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC009948.4-201ENST00000604692 675 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL591516.1-201ENST00000611326 274 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 uc_338.9-201ENST00000617424 182 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC138932.5-201ENST00000617759 563 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC026422.1-201ENST00000623961 452 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL118496.1-201ENST00000440201 1812 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC100871.1-201ENST00000507871 1456 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 SNORA7.4-201ENST00000384249 137 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 HMGN2P7-201ENST00000456186 273 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 RNU7-170P-201ENST00000459303 61 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 PHBP14-201ENST00000512887 367 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC009303.3-201ENST00000591103 736 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AL049844.2-201ENST00000604280 628 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
HLA-DQB2P05538 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB2P05538 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC107081.3-201ENST00000612715 2034 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 MTND5P1-201ENST00000445440 1375 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC092832.1-201ENST00000422934 400 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 RPL30P3-201ENST00000424262 333 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC009965.2-201ENST00000425328 970 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC006028.1-201ENST00000438379 402 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 BX510359.1-201ENST00000456973 237 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC034236.1-201ENST00000469891 373 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC115989.2-201ENST00000578640 563 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 CCDC58P3-201ENST00000590792 430 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 MTCO2P22-201ENST00000603246 681 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC012468.1-201ENST00000604888 430 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC103710.3-201ENST00000608157 948 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL159169.3-201ENST00000608871 561 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AP003072.4-201ENST00000624580 310 ntBASIC3.17□□□□□ -1.9
HLA-DQB2P05538 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQB2P05538 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQB2P05538 RNU6-532P-201ENST00000384318 107 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 PTMAP5-201ENST00000393073 333 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
HLA-DQB2P05538 TRGV6-201ENST00000417928 299 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms