Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A1P02462 OOSP1P1-201ENST00000423265 274 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AP000936.3-201ENST00000438127 255 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A1P02462 ST13P14-201ENST00000474095 734 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A1P02462 SCGB1D5P-201ENST00000515134 247 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A1P02462 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A1P02462 AP002812.4-201ENST00000532139 286 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.51□□□□□ -1.85
COL4A1P02462 AC007954.1-201ENST00000554198 494 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AC007424.1-203ENST00000554613 687 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AC027176.1-201ENST00000560204 514 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 ELOCP29-201ENST00000588193 334 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AL158196.1-201ENST00000616786 434 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 AL122125.1-201ENST00000616999 600 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A1P02462 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A1P02462 AL031985.3-201ENST00000565390 2449 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL4A1P02462 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.5□□□□□ -1.85
COL4A1P02462 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 GCNT6-201ENST00000379591 934 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 SNORA67.4-201ENST00000384688 142 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 AL356057.1-202ENST00000402263 756 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A1P02462 AC010486.1-201ENST00000511793 424 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 IGKV2D-23-201ENST00000518179 286 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 AL450472.3-201ENST00000615578 367 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 AC017002.4-201ENST00000604721 1525 ntBASIC3.5□□□□□ -1.85
COL4A1P02462 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
COL4A1P02462 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A1P02462 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
COL4A1P02462 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A1P02462 SNORA46-201ENST00000384762 135 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A1P02462 AC009963.1-201ENST00000417265 157 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 AC003982.1-202ENST00000469928 248 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A1P02462 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.49□□□□□ -1.85
COL4A1P02462 AL390334.1-201ENST00000556395 450 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 AC138761.3-201ENST00000579993 334 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A1P02462 AL592295.2-201ENST00000612578 206 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A1P02462 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A1P02462 AC138393.1-206ENST00000540997 1886 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.49□□□□□ -1.85
COL4A1P02462 U3.6-201ENST00000363622 211 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 AL360182.1-201ENST00000397433 468 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A1P02462 MRPL50P2-201ENST00000416821 482 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 RPL29P29-201ENST00000448725 423 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 RNU1-41P-201ENST00000516161 162 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 RNU1-48P-201ENST00000516400 162 ntBASIC3.49□□□□□ -1.85
COL4A1P02462 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
COL4A1P02462 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A1P02462 AL049780.3-201ENST00000624612 1583 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.48□□□□□ -1.85
COL4A1P02462 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A1P02462 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A1P02462 AC104446.1-201ENST00000613728 1321 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
COL4A1P02462 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A1P02462 MTCO1P52-201ENST00000433928 531 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 RPL21P41-201ENST00000459863 264 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A1P02462 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A1P02462 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.48□□□□□ -1.85
COL4A1P02462 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A1P02462 AL355493.4-201ENST00000618530 292 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
COL4A1P02462 NEAT1-202ENST00000501122 22743 ntBASIC3.48□□□□□ -1.85
COL4A1P02462 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A1P02462 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
COL4A1P02462 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A1P02462 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A1P02462 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A1P02462 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
COL4A1P02462 SETP12-201ENST00000514068 805 ntBASIC3.47□□□□□ -1.85
COL4A1P02462 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A1P02462 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A1P02462 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A1P02462 IGHVIII-44-202ENST00000636235 289 ntBASIC3.47□□□□□ -1.85
COL4A1P02462 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A1P02462 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A1P02462 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A1P02462 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A1P02462 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
COL4A1P02462 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A1P02462 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
COL4A1P02462 OR13C3-201ENST00000374781 1108 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AL138827.1-201ENST00000402666 306 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms