Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.75□□□□□ -1.65
MBD4O95243 AC026634.1-201ENST00000634369 198 ntBASIC4.75□□□□□ -1.65
MBD4O95243 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.75□□□□□ -1.65
MBD4O95243 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.75□□□□□ -1.65
MBD4O95243 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
MBD4O95243 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MBD4O95243 AC117529.2-201ENST00000512159 2068 ntBASIC4.74□□□□□ -1.65
MBD4O95243 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 PABPC1P7-201ENST00000413177 1513 ntBASIC4.74□□□□□ -1.65
MBD4O95243 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.74□□□□□ -1.65
MBD4O95243 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 RNU6-1066P-201ENST00000363573 105 ntBASIC4.74□□□□□ -1.65
MBD4O95243 RNU1-64P-201ENST00000365443 163 ntBASIC4.74□□□□□ -1.65
MBD4O95243 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 RPL32P23-201ENST00000397237 405 ntBASIC4.74□□□□□ -1.65
MBD4O95243 FCF1P2-201ENST00000415284 583 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.74□□□□□ -1.65
MBD4O95243 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.74□□□□□ -1.65
MBD4O95243 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 MTCO1P54-201ENST00000430139 712 ntBASIC4.74□□□□□ -1.65
MBD4O95243 HIGD1AP4-201ENST00000430194 280 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 AC241584.1-201ENST00000438469 1241 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AL121877.1-201ENST00000453704 622 ntBASIC4.74□□□□□ -1.65
MBD4O95243 S100A11P1-201ENST00000477525 312 ntBASIC4.74□□□□□ -1.65
MBD4O95243 PPIAP15-201ENST00000479662 484 ntBASIC4.74□□□□□ -1.65
MBD4O95243 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.74□□□□□ -1.65
MBD4O95243 NPM1P41-201ENST00000512920 831 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.74□□□□□ -1.65
MBD4O95243 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
MBD4O95243 OR5M7P-201ENST00000526140 972 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.74□□□□□ -1.65
MBD4O95243 AC015726.1-201ENST00000602353 681 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AL009028.1-201ENST00000604895 802 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.74□□□□□ -1.65
MBD4O95243 CYCSP41-201ENST00000616920 296 ntBASIC4.74□□□□□ -1.65
MBD4O95243 AC022960.3-201ENST00000619794 441 ntBASIC4.74□□□□□ -1.65
MBD4O95243 RMST_9.1-201ENST00000619945 193 ntBASIC4.74□□□□□ -1.65
MBD4O95243 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.74□□□□□ -1.65
MBD4O95243 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
MBD4O95243 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MBD4O95243 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MBD4O95243 DCAF13P1-201ENST00000495256 1330 ntBASIC4.73□□□□□ -1.65
MBD4O95243 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
MBD4O95243 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
MBD4O95243 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 OR4A15-201ENST00000314706 1035 ntBASIC4.73□□□□□ -1.65
MBD4O95243 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MBD4O95243 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
MBD4O95243 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 MIR134-201ENST00000385258 73 ntBASIC4.73□□□□□ -1.65
MBD4O95243 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MBD4O95243 MIR1251-201ENST00000408552 70 ntBASIC4.73□□□□□ -1.65
MBD4O95243 Z97055.1-201ENST00000419730 712 ntBASIC4.73□□□□□ -1.65
MBD4O95243 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 AC114973.1-201ENST00000429057 632 ntBASIC4.73□□□□□ -1.65
MBD4O95243 CKS1BP5-201ENST00000434172 273 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AL590399.6-201ENST00000446396 307 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AL031313.1-201ENST00000448435 256 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.73□□□□□ -1.65
MBD4O95243 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 AL645939.1-201ENST00000453429 797 ntBASIC4.73□□□□□ -1.65
MBD4O95243 OR9M1P-201ENST00000459641 921 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 TMEM248P1-201ENST00000510579 951 ntBASIC4.73□□□□□ -1.65
MBD4O95243 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 MYL12AP1-201ENST00000518490 515 ntBASIC4.73□□□□□ -1.65
MBD4O95243 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 AC087369.1-201ENST00000520775 996 ntBASIC4.73□□□□□ -1.65
MBD4O95243 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.73□□□□□ -1.65
MBD4O95243 LSM6P2-201ENST00000552208 177 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.73□□□□□ -1.65
MBD4O95243 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.73□□□□□ -1.65
MBD4O95243 AC012603.1-201ENST00000606424 528 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AC009237.15-201ENST00000610252 501 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AC010975.3-201ENST00000618727 978 ntBASIC4.73□□□□□ -1.65
MBD4O95243 AL356121.2-201ENST00000624715 780 ntBASIC4.73□□□□□ -1.65
MBD4O95243 MTND5P3-201ENST00000438536 1800 ntBASIC4.73□□□□□ -1.65
MBD4O95243 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.73□□□□□ -1.65
MBD4O95243 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms