Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 RNA5SP317-201ENST00000410176 116 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 RNA5SP311-201ENST00000411290 116 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC105402.1-201ENST00000413336 545 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 AC245054.1-201ENST00000420944 258 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 YME1L1P1-201ENST00000429435 297 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 Z85994.2-201ENST00000434327 452 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC007389.2-201ENST00000434630 306 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 Z99127.2-201ENST00000441426 334 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 UQCRHP3-201ENST00000451503 251 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 RPL30P11-201ENST00000495304 339 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOX2O60902 FTH1P24-201ENST00000503502 462 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 FTH1P21-201ENST00000512179 511 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC010265.1-201ENST00000513509 211 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 RNA5SP315-201ENST00000516340 116 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 RNA5SP312-201ENST00000517068 116 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 SNORA70.24-201ENST00000517233 118 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.43□□□□□ -1.86
SHOX2O60902 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOX2O60902 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.43□□□□□ -1.86
SHOX2O60902 AC055876.1-202ENST00000567053 138 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 MIR3200-201ENST00000580767 85 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC009303.3-201ENST00000591103 736 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 AC090525.3-201ENST00000605601 189 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.43□□□□□ -1.86
SHOX2O60902 AL391597.1-201ENST00000618707 694 ntBASIC3.43□□□□□ -1.86
SHOX2O60902 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOX2O60902 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHOX2O60902 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOX2O60902 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SHOX2O60902 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHOX2O60902 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHOX2O60902 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SHOX2O60902 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SHOX2O60902 AC006042.3-201ENST00000454684 1469 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.42□□□□□ -1.86
SHOX2O60902 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHOX2O60902 RNU4-31P-201ENST00000384211 141 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 CCNB2P1-201ENST00000399411 1150 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 VN1R51P-201ENST00000411675 945 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.42□□□□□ -1.86
SHOX2O60902 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.42□□□□□ -1.86
SHOX2O60902 RPL31P45-201ENST00000419532 356 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 ELOCP6-201ENST00000429066 328 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.42□□□□□ -1.86
SHOX2O60902 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 MED6P1-201ENST00000439659 713 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 TVP23BP2-201ENST00000455082 615 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.42□□□□□ -1.86
SHOX2O60902 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 ELOCP12-201ENST00000458706 328 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 ST13P14-201ENST00000474095 734 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.42□□□□□ -1.86
SHOX2O60902 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.42□□□□□ -1.86
SHOX2O60902 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.42□□□□□ -1.86
SHOX2O60902 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SHOX2O60902 AL049870.4-201ENST00000555741 486 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 MIR548Y-201ENST00000582739 110 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AP003117.2-201ENST00000606010 545 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 AL356490.1-201ENST00000623079 479 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 MIR492-201ENST00000638676 116 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
SHOX2O60902 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
SHOX2O60902 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHOX2O60902 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SHOX2O60902 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOX2O60902 AC000367.1-201ENST00000452711 1766 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 AL035425.3-201ENST00000564206 4996 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOX2O60902 RNA5SP167-201ENST00000365461 116 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOX2O60902 RN7SKP159-201ENST00000410657 292 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 Z92545.1-201ENST00000411782 234 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 PRELID3BP11-201ENST00000414230 479 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.41□□□□□ -1.86
SHOX2O60902 MTND2P15-201ENST00000418575 892 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.41□□□□□ -1.86
SHOX2O60902 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.41□□□□□ -1.86
SHOX2O60902 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.41□□□□□ -1.86
SHOX2O60902 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.41□□□□□ -1.86
SHOX2O60902 PLGLA-201ENST00000465668 449 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 RPL7P49-201ENST00000471402 708 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.41□□□□□ -1.86
SHOX2O60902 RN7SL323P-201ENST00000494712 295 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 PCNAP1-201ENST00000505363 709 ntBASIC3.41□□□□□ -1.86
SHOX2O60902 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms