Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.29□□□□□ -1.72
LDB2O43679 PPBPP1-201ENST00000510807 373 ntBASIC4.29□□□□□ -1.72
LDB2O43679 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 RNU6-678P-201ENST00000516832 109 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AP001207.1-201ENST00000524051 481 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.29□□□□□ -1.72
LDB2O43679 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 AC024909.2-201ENST00000553035 286 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC090515.3-201ENST00000560431 315 ntBASIC4.29□□□□□ -1.72
LDB2O43679 MTCYBP28-201ENST00000566728 1132 ntBASIC4.29□□□□□ -1.72
LDB2O43679 MIR3915-201ENST00000578518 97 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 AC091488.1-201ENST00000604239 660 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AL590392.1-201ENST00000604960 446 ntBASIC4.29□□□□□ -1.72
LDB2O43679 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 AL136981.2-201ENST00000617319 734 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC011944.2-201ENST00000624440 683 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC007494.3-201ENST00000624660 743 ntBASIC4.29□□□□□ -1.72
LDB2O43679 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LDB2O43679 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LDB2O43679 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDB2O43679 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
LDB2O43679 ASNSP1-201ENST00000518311 1939 ntBASIC4.29□□□□□ -1.72
LDB2O43679 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDB2O43679 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 AL158163.1-201ENST00000603915 1649 ntBASIC4.28□□□□□ -1.72
LDB2O43679 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LDB2O43679 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 AL451142.2-201ENST00000429076 2090 ntBASIC4.28□□□□□ -1.72
LDB2O43679 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.28□□□□□ -1.72
LDB2O43679 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LDB2O43679 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 Y_RNA.51-201ENST00000362725 102 ntBASIC4.28□□□□□ -1.72
LDB2O43679 SUGT1P1-201ENST00000379514 476 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AL031577.2-201ENST00000404133 280 ntBASIC4.28□□□□□ -1.72
LDB2O43679 RPL23AP47-201ENST00000408017 460 ntBASIC4.28□□□□□ -1.72
LDB2O43679 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 EIF4A1P3-201ENST00000411521 244 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 AL161631.1-201ENST00000417933 486 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AL358176.3-201ENST00000420757 454 ntBASIC4.28□□□□□ -1.72
LDB2O43679 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 CEACAMP1-201ENST00000434624 1035 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 ACTR3P2-201ENST00000439585 1257 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 AC010307.1-201ENST00000467206 836 ntBASIC4.28□□□□□ -1.72
LDB2O43679 RPL7P1-201ENST00000468161 747 ntBASIC4.28□□□□□ -1.72
LDB2O43679 RPL7P9-201ENST00000468715 747 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC103987.1-201ENST00000473394 348 ntBASIC4.28□□□□□ -1.72
LDB2O43679 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 BNIP3P41-201ENST00000503774 571 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC011352.3-201ENST00000505162 593 ntBASIC4.28□□□□□ -1.72
LDB2O43679 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.28□□□□□ -1.72
LDB2O43679 MTND5P13-201ENST00000513046 1079 ntBASIC4.28□□□□□ -1.72
LDB2O43679 RN7SKP122-201ENST00000515923 296 ntBASIC4.28□□□□□ -1.72
LDB2O43679 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 TOMM20P2-201ENST00000540082 421 ntBASIC4.28□□□□□ -1.72
LDB2O43679 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.28□□□□□ -1.72
LDB2O43679 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.28□□□□□ -1.72
LDB2O43679 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.28□□□□□ -1.72
LDB2O43679 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.28□□□□□ -1.72
LDB2O43679 AC123786.2-201ENST00000603459 275 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AP000811.1-201ENST00000603803 651 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC018714.1-201ENST00000605028 208 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.28□□□□□ -1.72
LDB2O43679 AC005962.2-201ENST00000611427 652 ntBASIC4.28□□□□□ -1.72
LDB2O43679 HULC.1-201ENST00000612720 240 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC005332.6-201ENST00000613178 446 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AC116563.2-201ENST00000624751 535 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.28□□□□□ -1.72
LDB2O43679 MKKS-204ENST00000639674 192 ntBASIC4.28□□□□□ -1.72
LDB2O43679 OR52H1-202ENST00000641796 1061 ntBASIC4.28□□□□□ -1.72
LDB2O43679 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LDB2O43679 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms