Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC008885.2-201ENST00000509506 930 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.39□□□□□ -1.71
SMAD6O43541 PARP4P3-201ENST00000510265 317 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC008958.1-201ENST00000511047 682 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 HIGD1AP18-201ENST00000520730 278 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 CBX3P7-201ENST00000532876 502 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.39□□□□□ -1.71
SMAD6O43541 HIGD1AP17-201ENST00000554576 276 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.39□□□□□ -1.71
SMAD6O43541 NPM1P47-201ENST00000560843 856 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.39□□□□□ -1.71
SMAD6O43541 AL121834.1-201ENST00000572284 509 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC136624.4-201ENST00000573044 370 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.39□□□□□ -1.71
SMAD6O43541 MIR4999-201ENST00000585029 91 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 AC068020.1-201ENST00000594215 661 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 IPO5P1-202ENST00000600039 287 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 AC010857.1-201ENST00000606398 594 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL513477.2-201ENST00000607858 568 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL592148.2-201ENST00000612210 372 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL353726.1-201ENST00000614041 1000 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL731566.2-201ENST00000618971 317 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 VN1R7P-201ENST00000619242 903 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 AC099654.13-201ENST00000639774 207 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 ZNF833P-201ENST00000424938 1494 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 SNORA26.8-201ENST00000391306 124 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AL161909.1-201ENST00000397390 712 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AL031577.2-201ENST00000404133 280 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 RAP1BP3-201ENST00000407180 549 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.38□□□□□ -1.71
SMAD6O43541 RNA5SP36-201ENST00000410197 133 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 RN7SKP235-201ENST00000410662 305 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 AL591503.2-201ENST00000442314 1005 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 EEF1A1P1-201ENST00000447052 739 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AL157827.1-201ENST00000447622 132 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 RPS27AP15-201ENST00000447672 466 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 UQCRHP4-201ENST00000471686 272 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC011979.1-201ENST00000472300 483 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC103987.1-201ENST00000473394 348 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 RPS6P4-201ENST00000494693 758 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC108475.1-201ENST00000507880 950 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC005178.1-201ENST00000508392 440 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC091965.2-201ENST00000512324 613 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.38□□□□□ -1.71
SMAD6O43541 snoZ278.1-201ENST00000517059 112 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 MTND4LP26-201ENST00000518144 282 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 HIGD1AP10-201ENST00000527837 282 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 CYP2C60P-201ENST00000566088 139 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 RN7SL176P-201ENST00000580352 264 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
SMAD6O43541 AC006539.2-201ENST00000601729 572 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AL136363.2-201ENST00000604173 851 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC087241.4-201ENST00000612441 480 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC009878.1-201ENST00000621819 340 ntBASIC4.38□□□□□ -1.71
SMAD6O43541 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SMAD6O43541 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.38□□□□□ -1.71
SMAD6O43541 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMAD6O43541 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms