Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.72□□□□□ -1.65
PHGDHO43175 AC091489.2-201ENST00000566263 604 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC090312.1-201ENST00000580637 348 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC083760.1-201ENST00000589621 670 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.72□□□□□ -1.65
PHGDHO43175 PRELID3BP8-201ENST00000604148 295 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 AC087752.4-201ENST00000605911 462 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 MTND4P4-201ENST00000439033 1366 ntBASIC4.72□□□□□ -1.65
PHGDHO43175 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHGDHO43175 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PHGDHO43175 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PHGDHO43175 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PHGDHO43175 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
PHGDHO43175 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PHGDHO43175 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PHGDHO43175 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PHGDHO43175 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PHGDHO43175 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PHGDHO43175 Y_RNA.97-201ENST00000363094 102 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RNU4-91P-201ENST00000364778 135 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 OR5H15-201ENST00000383696 930 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RNU1-82P-201ENST00000390851 165 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL049697.2-201ENST00000403708 294 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 RN7SKP266-201ENST00000410232 287 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 RPL17P12-201ENST00000413391 526 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 CHEK2P3-201ENST00000416118 248 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 RPL37P21-201ENST00000435890 276 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL450263.2-201ENST00000439400 589 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 ST13P20-201ENST00000447996 1065 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RPL7P31-201ENST00000450192 724 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 RNA5SP269-201ENST00000459032 137 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RN7SL515P-201ENST00000463999 297 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RN7SL177P-201ENST00000476596 299 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 UBTFL6-201ENST00000477929 1024 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 AP000797.1-201ENST00000478870 387 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC109462.1-201ENST00000491087 368 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 CBX3P3-201ENST00000508108 532 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 AC005798.1-201ENST00000513715 387 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.71□□□□□ -1.66
PHGDHO43175 RN7SKP234-201ENST00000517173 224 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC025881.1-201ENST00000518851 512 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 OR5AP1P-201ENST00000529730 940 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL139174.1-201ENST00000531489 886 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 OR10G5P-201ENST00000532733 358 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.71□□□□□ -1.66
PHGDHO43175 AC133555.2-201ENST00000550213 292 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
PHGDHO43175 MIR4458-201ENST00000578872 75 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.71□□□□□ -1.66
PHGDHO43175 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
PHGDHO43175 MIR544B-201ENST00000582372 78 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 MIR548AB-201ENST00000584917 84 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC008759.1-201ENST00000589783 983 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AP000403.1-201ENST00000603349 851 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 AC010678.1-201ENST00000614118 713 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL357080.1-201ENST00000617394 239 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AL445264.1-201ENST00000621719 171 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHGDHO43175 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.71□□□□□ -1.66
PHGDHO43175 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 C4BPAP1-201ENST00000415474 1893 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.71□□□□□ -1.66
PHGDHO43175 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
PHGDHO43175 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHGDHO43175 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 AC097504.1-201ENST00000515103 2415 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms