Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 AC007823.1-201ENST00000569932 1566 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC066616.2-201ENST00000559334 1481 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 SNORD9-201ENST00000362566 104 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLDN3O15551 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN3O15551 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN3O15551 HSPD1P21-201ENST00000436541 245 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 MTND4P15-201ENST00000437913 1033 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AL353718.1-201ENST00000451028 517 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 MTCO3P20-201ENST00000454926 688 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN3O15551 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN3O15551 COL6A4P2-205ENST00000509855 506 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 OR6C73P-201ENST00000546432 358 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 MIR4504-201ENST00000577413 92 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 AC008687.2-201ENST00000597865 520 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC245100.7-201ENST00000609678 442 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC069209.1-201ENST00000619282 651 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC112200.1-201ENST00000625015 234 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 AC244205.2-202ENST00000635781 342 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AC132825.7-201ENST00000638744 335 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 AL732372.2-225ENST00000642124 456 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CLDN3O15551 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN3O15551 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC107081.3-201ENST00000612715 2034 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN3O15551 RNU6-792P-201ENST00000363490 107 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 DSTNP4-201ENST00000399472 474 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN3O15551 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC091286.1-201ENST00000431233 461 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AL513175.1-201ENST00000431492 780 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 RPL7P28-201ENST00000437739 740 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 FABP5P3-201ENST00000437960 408 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC092170.1-201ENST00000440211 356 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC015724.1-201ENST00000478577 156 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC005726.1-201ENST00000494679 427 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 NDUFB4P9-201ENST00000511646 388 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 RNU4-60P-201ENST00000517239 135 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AF279873.1-201ENST00000523393 313 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN3O15551 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN3O15551 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC079148.1-201ENST00000565944 819 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC106734.1-201ENST00000568646 663 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.94□□□□□ -1.78
CLDN3O15551 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.94□□□□□ -1.78
CLDN3O15551 KLKP1-201ENST00000595979 403 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC006077.1-201ENST00000604746 343 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AL445493.3-201ENST00000619568 477 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 AC022079.2-201ENST00000619739 566 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN3O15551 OR6C71P-202ENST00000641886 1107 ntBASIC3.94□□□□□ -1.78
CLDN3O15551 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN3O15551 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
CLDN3O15551 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CLDN3O15551 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN3O15551 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN3O15551 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN3O15551 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN3O15551 MIR16-2-201ENST00000362117 81 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 MIR449B-201ENST00000384995 97 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AL355379.1-201ENST00000405542 640 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 RNU4-27P-201ENST00000410889 139 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.93□□□□□ -1.78
CLDN3O15551 AC008173.1-201ENST00000418901 264 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN3O15551 MOB1AP1-201ENST00000430903 535 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 RPS26P30-201ENST00000443431 335 ntBASIC3.93□□□□□ -1.78
CLDN3O15551 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.93□□□□□ -1.78
CLDN3O15551 MTND1P33-201ENST00000446251 917 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms