Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 AL645931.1-201ENST00000439737 410 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM1O15116 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 AC008280.2-201ENST00000455473 307 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 RPL7P5-201ENST00000471472 736 ntBASIC3.53□□□□□ -1.84
LSM1O15116 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 MTND4LP22-201ENST00000508209 276 ntBASIC3.53□□□□□ -1.84
LSM1O15116 HPRT1P1-201ENST00000509498 657 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
LSM1O15116 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM1O15116 AC093014.1-201ENST00000548926 724 ntBASIC3.53□□□□□ -1.84
LSM1O15116 CKS1BP1-201ENST00000555221 240 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 AC005951.1-201ENST00000576706 485 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AC090616.5-202ENST00000582111 297 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM1O15116 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.53□□□□□ -1.84
LSM1O15116 KATNBL1P1-201ENST00000605192 748 ntBASIC3.53□□□□□ -1.84
LSM1O15116 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 FRG1HP-204ENST00000617940 757 ntBASIC3.53□□□□□ -1.84
LSM1O15116 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
LSM1O15116 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM1O15116 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
LSM1O15116 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
LSM1O15116 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM1O15116 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
LSM1O15116 AC117529.2-201ENST00000512159 2068 ntBASIC3.52□□□□□ -1.85
LSM1O15116 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LSM1O15116 RPL32P3-201ENST00000359025 275 ntBASIC3.52□□□□□ -1.85
LSM1O15116 RNA5SP293-201ENST00000410527 113 ntBASIC3.52□□□□□ -1.85
LSM1O15116 RPL31P2-201ENST00000413849 377 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC005517.2-201ENST00000424673 553 ntBASIC3.52□□□□□ -1.85
LSM1O15116 RPL21P112-201ENST00000434403 463 ntBASIC3.52□□□□□ -1.85
LSM1O15116 TPT1P12-201ENST00000448968 492 ntBASIC3.52□□□□□ -1.85
LSM1O15116 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM1O15116 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM1O15116 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM1O15116 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM1O15116 AC008565.1-201ENST00000509046 885 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM1O15116 MTCO1P49-201ENST00000523429 802 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM1O15116 CYCSP30-201ENST00000546447 172 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AL442163.2-201ENST00000553912 710 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM1O15116 AC027104.1-201ENST00000563702 681 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC087499.8-201ENST00000578406 226 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AC125494.3-201ENST00000602759 455 ntBASIC3.52□□□□□ -1.85
LSM1O15116 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AP001033.2-201ENST00000609701 1003 ntBASIC3.52□□□□□ -1.85
LSM1O15116 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM1O15116 AC018926.3-201ENST00000618841 406 ntBASIC3.52□□□□□ -1.85
LSM1O15116 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM1O15116 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM1O15116 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM1O15116 AC110774.1-201ENST00000623567 2018 ntBASIC3.52□□□□□ -1.85
LSM1O15116 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM1O15116 FAM91A3P-201ENST00000456826 2544 ntBASIC3.52□□□□□ -1.85
LSM1O15116 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM1O15116 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM1O15116 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM1O15116 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM1O15116 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM1O15116 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 ENSAP3-201ENST00000312710 333 ntBASIC3.51□□□□□ -1.85
LSM1O15116 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 RNU6-1243P-201ENST00000364028 107 ntBASIC3.51□□□□□ -1.85
LSM1O15116 SNORA73.2-201ENST00000364946 201 ntBASIC3.51□□□□□ -1.85
LSM1O15116 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
LSM1O15116 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC092745.2-202ENST00000411880 369 ntBASIC3.51□□□□□ -1.85
LSM1O15116 PNRC2P1-201ENST00000423940 420 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AL591419.1-201ENST00000427423 339 ntBASIC3.51□□□□□ -1.85
LSM1O15116 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 UBE2V1P1-201ENST00000430836 445 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC005189.1-201ENST00000431286 310 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AL513175.1-201ENST00000431492 780 ntBASIC3.51□□□□□ -1.85
LSM1O15116 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 YWHAZP8-201ENST00000436935 731 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC074367.1-201ENST00000438685 1125 ntBASIC3.51□□□□□ -1.85
LSM1O15116 RPS27P5-201ENST00000444247 244 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 HSFY6P-201ENST00000445573 403 ntBASIC3.51□□□□□ -1.85
LSM1O15116 MRPS31P2-201ENST00000451581 518 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms