Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.47□□□□□ -1.53
CUX2O14529 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 BX276092.3-201ENST00000424182 230 ntBASIC5.47□□□□□ -1.53
CUX2O14529 AC006989.1-201ENST00000427212 131 ntBASIC5.47□□□□□ -1.53
CUX2O14529 FTH1P6-201ENST00000430768 320 ntBASIC5.47□□□□□ -1.53
CUX2O14529 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.47□□□□□ -1.53
CUX2O14529 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.47□□□□□ -1.53
CUX2O14529 RPL23AP23-201ENST00000452590 471 ntBASIC5.47□□□□□ -1.53
CUX2O14529 SUMO2P4-201ENST00000504193 276 ntBASIC5.47□□□□□ -1.53
CUX2O14529 AC008413.1-201ENST00000511864 177 ntBASIC5.47□□□□□ -1.53
CUX2O14529 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.47□□□□□ -1.53
CUX2O14529 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.47□□□□□ -1.53
CUX2O14529 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.47□□□□□ -1.53
CUX2O14529 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.47□□□□□ -1.53
CUX2O14529 AC079089.3-201ENST00000603094 673 ntBASIC5.47□□□□□ -1.53
CUX2O14529 SNORA35B-201ENST00000607417 129 ntBASIC5.47□□□□□ -1.53
CUX2O14529 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.47□□□□□ -1.53
CUX2O14529 MIR622-201ENST00000638396 96 ntBASIC5.47□□□□□ -1.53
CUX2O14529 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.47□□□□□ -1.53
CUX2O14529 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUX2O14529 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CUX2O14529 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CUX2O14529 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CUX2O14529 SKP1P1-201ENST00000438081 489 ntBASIC5.46□□□□□ -1.53
CUX2O14529 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.46□□□□□ -1.53
CUX2O14529 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.46□□□□□ -1.53
CUX2O14529 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.46□□□□□ -1.53
CUX2O14529 RMST_9.1-201ENST00000619945 193 ntBASIC5.46□□□□□ -1.53
CUX2O14529 AC244205.2-202ENST00000635781 342 ntBASIC5.46□□□□□ -1.53
CUX2O14529 AC080128.1-201ENST00000474389 1917 ntBASIC5.46□□□□□ -1.54
CUX2O14529 CR381670.1-201ENST00000624291 1693 ntBASIC5.46□□□□□ -1.54
CUX2O14529 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.46□□□□□ -1.54
CUX2O14529 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUX2O14529 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUX2O14529 U8.2-201ENST00000363156 134 ntBASIC5.45□□□□□ -1.54
CUX2O14529 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUX2O14529 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.45□□□□□ -1.54
CUX2O14529 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.45□□□□□ -1.54
CUX2O14529 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CUX2O14529 RNU6-84P-201ENST00000607737 102 ntBASIC5.45□□□□□ -1.54
CUX2O14529 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CUX2O14529 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.45□□□□□ -1.54
CUX2O14529 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.45□□□□□ -1.54
CUX2O14529 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CUX2O14529 RNA5SP445-201ENST00000515889 115 ntBASIC5.45□□□□□ -1.54
CUX2O14529 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CUX2O14529 AC138761.3-201ENST00000579993 334 ntBASIC5.45□□□□□ -1.54
CUX2O14529 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.45□□□□□ -1.54
CUX2O14529 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.45□□□□□ -1.54
CUX2O14529 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
CUX2O14529 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.44□□□□□ -1.54
CUX2O14529 CR382285.2-201ENST00000624662 1495 ntBASIC5.44□□□□□ -1.54
CUX2O14529 AL356968.1-201ENST00000416622 474 ntBASIC5.44□□□□□ -1.54
CUX2O14529 AL591806.2-201ENST00000433122 173 ntBASIC5.44□□□□□ -1.54
CUX2O14529 UBE2V2P1-201ENST00000434717 398 ntBASIC5.44□□□□□ -1.54
CUX2O14529 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.44□□□□□ -1.54
CUX2O14529 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.44□□□□□ -1.54
CUX2O14529 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.44□□□□□ -1.54
CUX2O14529 AC113398.2-201ENST00000507630 558 ntBASIC5.44□□□□□ -1.54
CUX2O14529 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CUX2O14529 AL035413.2-201ENST00000604801 525 ntBASIC5.44□□□□□ -1.54
CUX2O14529 AL158196.1-201ENST00000616786 434 ntBASIC5.44□□□□□ -1.54
CUX2O14529 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CUX2O14529 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUX2O14529 DCAF13P3-201ENST00000561147 1334 ntBASIC5.43□□□□□ -1.54
CUX2O14529 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CUX2O14529 AC020633.1-201ENST00000468439 2247 ntBASIC5.43□□□□□ -1.54
CUX2O14529 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUX2O14529 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.43□□□□□ -1.54
CUX2O14529 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.43□□□□□ -1.54
CUX2O14529 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.43□□□□□ -1.54
CUX2O14529 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.43□□□□□ -1.54
CUX2O14529 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.43□□□□□ -1.54
CUX2O14529 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.43□□□□□ -1.54
CUX2O14529 RNA5SP458-201ENST00000516188 119 ntBASIC5.43□□□□□ -1.54
CUX2O14529 SNORD116-30-201ENST00000516468 85 ntBASIC5.43□□□□□ -1.54
CUX2O14529 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.43□□□□□ -1.54
CUX2O14529 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.43□□□□□ -1.54
CUX2O14529 VN1R81P-201ENST00000602085 372 ntBASIC5.43□□□□□ -1.54
CUX2O14529 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.43□□□□□ -1.54
CUX2O14529 AP005212.4-201ENST00000614206 710 ntBASIC5.43□□□□□ -1.54
CUX2O14529 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.43□□□□□ -1.54
CUX2O14529 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUX2O14529 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CUX2O14529 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CUX2O14529 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.42□□□□□ -1.54
CUX2O14529 AL513302.2-201ENST00000562313 1842 ntBASIC5.42□□□□□ -1.54
CUX2O14529 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUX2O14529 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUX2O14529 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
CUX2O14529 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.42□□□□□ -1.54
CUX2O14529 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CUX2O14529 RPS27AP9-201ENST00000477681 438 ntBASIC5.42□□□□□ -1.54
CUX2O14529 AC016687.1-201ENST00000482574 353 ntBASIC5.42□□□□□ -1.54
CUX2O14529 RFPL4AP3-201ENST00000515267 345 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms