Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MTCYBP38-201ENST00000417160 1123 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC004448.2-201ENST00000422360 586 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AL035407.1-201ENST00000429211 571 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 PSMA2P3-201ENST00000429685 675 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 AL590103.1-201ENST00000434488 307 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 AL356276.2-201ENST00000435919 558 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 RPL23AP43-201ENST00000446445 471 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 RPS27AP8-201ENST00000452665 445 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC006967.1-201ENST00000467608 589 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 RPS15AP17-201ENST00000470598 390 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 RPL23AP65-201ENST00000475608 468 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 FAM172BP-201ENST00000487497 1089 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC108022.1-201ENST00000493466 478 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXN3O00409 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
FOXN3O00409 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXN3O00409 DEFB131D-201ENST00000526803 184 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 OR5D15P-201ENST00000531671 942 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC092470.1-201ENST00000546187 132 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 MIR3915-201ENST00000578518 97 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 AL009028.1-201ENST00000604895 802 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC078899.5-201ENST00000612475 178 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AC073530.2-201ENST00000623987 261 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
FOXN3O00409 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXN3O00409 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
FOXN3O00409 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.84□□□□□ -1.64
FOXN3O00409 AC139769.1-204ENST00000472297 1931 ntBASIC4.84□□□□□ -1.64
FOXN3O00409 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXN3O00409 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXN3O00409 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 RPL21P132-201ENST00000331267 462 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RNA5SP397-201ENST00000391323 118 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 ENSAP1-201ENST00000392855 326 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 ARF4P3-201ENST00000397387 509 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 SDHCP2-201ENST00000398565 501 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL953862.1-201ENST00000423016 168 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXN3O00409 AL589823.1-201ENST00000429577 183 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL049745.1-201ENST00000433953 286 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 MTND4P6-201ENST00000438297 472 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC012671.1-201ENST00000451912 203 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RPL35AP28-201ENST00000459730 331 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC097493.1-201ENST00000463958 372 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RPL7P22-201ENST00000466005 733 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RPL30P6-201ENST00000475925 342 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 HMGB1P21-201ENST00000502313 581 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RNF138P1-201ENST00000502765 546 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 TMEM251P1-201ENST00000503717 318 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC021146.3-201ENST00000511911 260 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 IGKV1-32-201ENST00000519290 311 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.83□□□□□ -1.64
FOXN3O00409 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXN3O00409 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXN3O00409 RN7SL690P-201ENST00000582087 240 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC010201.1-201ENST00000605051 540 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC105129.3-201ENST00000605455 485 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC024940.4-201ENST00000605507 246 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC091979.2-201ENST00000607514 214 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 AC122108.2-201ENST00000611946 526 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXN3O00409 AL356596.1-201ENST00000624230 379 ntBASIC4.83□□□□□ -1.64
FOXN3O00409 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXN3O00409 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms