Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.13□□□□□ -1.75
O00370 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.13□□□□□ -1.75
O00370 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
O00370 RNU6-356P-201ENST00000384140 107 ntBASIC4.13□□□□□ -1.75
O00370 MIR199A2-201ENST00000385289 110 ntBASIC4.13□□□□□ -1.75
O00370 RNU6-628P-201ENST00000410675 107 ntBASIC4.13□□□□□ -1.75
O00370 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.13□□□□□ -1.75
O00370 RPL17P36-201ENST00000420302 549 ntBASIC4.13□□□□□ -1.75
O00370 CYP4F29P-201ENST00000420685 446 ntBASIC4.13□□□□□ -1.75
O00370 OSTCP5-201ENST00000425293 453 ntBASIC4.13□□□□□ -1.75
O00370 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.13□□□□□ -1.75
O00370 HMGB1P48-201ENST00000446155 598 ntBASIC4.13□□□□□ -1.75
O00370 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AL606517.1-201ENST00000446914 387 ntBASIC4.13□□□□□ -1.75
O00370 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 CDC42P1-201ENST00000456658 548 ntBASIC4.13□□□□□ -1.75
O00370 AC010307.1-201ENST00000467206 836 ntBASIC4.13□□□□□ -1.75
O00370 AC073522.1-201ENST00000483312 377 ntBASIC4.13□□□□□ -1.75
O00370 RPS3AP6-201ENST00000484430 795 ntBASIC4.13□□□□□ -1.75
O00370 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.13□□□□□ -1.75
O00370 AC026414.1-201ENST00000504046 698 ntBASIC4.13□□□□□ -1.75
O00370 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 AC026726.1-201ENST00000512859 601 ntBASIC4.13□□□□□ -1.75
O00370 AC026402.1-201ENST00000513642 170 ntBASIC4.13□□□□□ -1.75
O00370 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 NDUFS5P6-201ENST00000529136 295 ntBASIC4.13□□□□□ -1.75
O00370 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.13□□□□□ -1.75
O00370 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AC087897.1-201ENST00000550134 156 ntBASIC4.13□□□□□ -1.75
O00370 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AGGF1P6-201ENST00000569213 976 ntBASIC4.13□□□□□ -1.75
O00370 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.13□□□□□ -1.75
O00370 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.13□□□□□ -1.75
O00370 AC053481.4-201ENST00000583164 216 ntBASIC4.13□□□□□ -1.75
O00370 AP001542.2-201ENST00000593141 364 ntBASIC4.13□□□□□ -1.75
O00370 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 AC112220.2-201ENST00000605513 533 ntBASIC4.13□□□□□ -1.75
O00370 AC092608.3-201ENST00000625017 386 ntBASIC4.13□□□□□ -1.75
O00370 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
O00370 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
O00370 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
O00370 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
O00370 AC111188.2-201ENST00000529697 1387 ntBASIC4.13□□□□□ -1.75
O00370 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
O00370 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
O00370 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
O00370 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 ZNF29P-201ENST00000225587 168 ntBASIC4.12□□□□□ -1.75
O00370 AP000568.1-201ENST00000282964 442 ntBASIC4.12□□□□□ -1.75
O00370 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
O00370 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
O00370 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.12□□□□□ -1.75
O00370 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
O00370 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 RN7SKP263-201ENST00000411194 309 ntBASIC4.12□□□□□ -1.75
O00370 MTCO2P8-201ENST00000412213 658 ntBASIC4.12□□□□□ -1.75
O00370 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.12□□□□□ -1.75
O00370 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 AC093698.1-201ENST00000423843 571 ntBASIC4.12□□□□□ -1.75
O00370 PSMA2P3-201ENST00000429685 675 ntBASIC4.12□□□□□ -1.75
O00370 MTCYBP15-201ENST00000433123 1127 ntBASIC4.12□□□□□ -1.75
O00370 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.12□□□□□ -1.75
O00370 Z74696.2-201ENST00000436514 498 ntBASIC4.12□□□□□ -1.75
O00370 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
O00370 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 RPL21P11-201ENST00000461458 483 ntBASIC4.12□□□□□ -1.75
O00370 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 AC091860.1-201ENST00000505723 432 ntBASIC4.12□□□□□ -1.75
O00370 SNX5P1-201ENST00000505757 1041 ntBASIC4.12□□□□□ -1.75
O00370 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 AC020593.1-201ENST00000507399 299 ntBASIC4.12□□□□□ -1.75
O00370 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.12□□□□□ -1.75
O00370 RNU6-352P-201ENST00000516908 107 ntBASIC4.12□□□□□ -1.75
O00370 RNU6-1028P-201ENST00000517164 93 ntBASIC4.12□□□□□ -1.75
O00370 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 IGJP1-201ENST00000522682 475 ntBASIC4.12□□□□□ -1.75
O00370 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 CENPUP2-201ENST00000555897 1186 ntBASIC4.12□□□□□ -1.75
O00370 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.12□□□□□ -1.75
O00370 AL133457.1-201ENST00000564251 987 ntBASIC4.12□□□□□ -1.75
O00370 AC015726.1-201ENST00000602353 681 ntBASIC4.12□□□□□ -1.75
O00370 PART1_2.1-201ENST00000612397 250 ntBASIC4.12□□□□□ -1.75
O00370 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.12□□□□□ -1.75
O00370 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.12□□□□□ -1.75
O00370 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
O00370 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms