Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1AO00322 MTND4LP24-201ENST00000572277 291 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 MTCO3P22-201ENST00000603219 784 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AC099778.2-201ENST00000610904 211 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 U6.48-201ENST00000618523 106 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 DDX6P1-205ENST00000441966 1436 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 MTND4P31-201ENST00000425607 1343 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK1AO00322 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 RNA5SP197-201ENST00000363357 119 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC234782.4-201ENST00000417646 1048 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC092017.2-201ENST00000427600 362 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1AO00322 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK1AO00322 MTND2P21-201ENST00000436242 1042 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC105402.2-201ENST00000438503 358 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 TPTE2P6-202ENST00000445572 1007 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 RPL37P3-201ENST00000456825 293 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 AL672167.3-201ENST00000465951 960 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AL035404.1-201ENST00000497982 568 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC112198.1-201ENST00000505369 1220 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1AO00322 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 RNU6-760P-201ENST00000516078 97 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 RN7SKP82-201ENST00000516786 223 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 IGKV2-36-201ENST00000519999 223 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1AO00322 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.16□□□□□ -1.9
UPK1AO00322 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1AO00322 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1AO00322 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UPK1AO00322 DCAF13P3-201ENST00000561147 1334 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1AO00322 AC138393.1-206ENST00000540997 1886 ntBASIC3.16□□□□□ -1.9
UPK1AO00322 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
UPK1AO00322 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
UPK1AO00322 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
UPK1AO00322 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.9
UPK1AO00322 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.9
UPK1AO00322 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UPK1AO00322 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UPK1AO00322 SNORA27.3-201ENST00000364937 134 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
UPK1AO00322 AC069218.2-201ENST00000411665 344 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 AIMP1P1-201ENST00000418670 937 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.15□□□□□ -1.91
UPK1AO00322 HMGN2P31-201ENST00000432430 273 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.15□□□□□ -1.91
UPK1AO00322 FTH1P1-201ENST00000437933 532 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.15□□□□□ -1.91
UPK1AO00322 RPL26P28-201ENST00000451325 435 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.15□□□□□ -1.91
UPK1AO00322 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 AP001086.1-201ENST00000494882 321 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC012170.1-201ENST00000495139 359 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 KCTD9P5-201ENST00000504141 1170 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 OR8I1P-201ENST00000529291 931 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.91
UPK1AO00322 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.15□□□□□ -1.91
UPK1AO00322 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.15□□□□□ -1.91
UPK1AO00322 AC010680.4-201ENST00000605334 543 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC015802.5-201ENST00000607478 399 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
UPK1AO00322 AC034229.5-201ENST00000624258 185 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms